Workflow: download_fastq.cwl
Fetched 2024-04-25 06:10:16 GMT
Verified with cwltool version 3.1.20221201130942
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
This workflow is Open Source and may be reused according to the terms of:
Apache License 2.0
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| aws_config | File | ||
| s3_profile | String | ||
| s3_endpoint | String | ||
| fastq_read1_md5 | String[] | ||
| fastq_read1_uri | String[] | ||
| fastq_read2_md5 | String[] | ||
| fastq_read2_uri | String[] | ||
| aws_shared_credentials | File |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| download_f1 |
download_check.cwl
(Workflow)
|
||
| download_f2 |
download_check.cwl
(Workflow)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| downloaded_fastq_read1 | File[] | ||
| downloaded_fastq_read2 | File[] | ||
| time_metrics_from_download_f1 | File[] | ||
| time_metrics_from_download_f2 | File[] |
Permalink:
https://w3id.org/cwl/view/git/13c106834d6c9031de08496faeff521740a0c95f/genomel/cwl/workflows/utils/download_fastq.cwl
