Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph bgzip and index VCF

https://github.com/acoffman/dockstore-test.git

Path: Dockstore.cwl

Branch/Commit ID: master
workflow graph fileSizer.cwl

https://github.com/hubmapconsortium/spatial-transcriptomics-pipeline.git

Path: steps/fileSizer.cwl

Branch/Commit ID: master
workflow graph module-2

https://github.com/mskcc/roslin-variant.git

Path: setup/cwl/module-2.cwl

Branch/Commit ID: dev
workflow graph revcomp.cwl

https://github.com/alexbarrera/GGR-cwl.git

Path: workflows/workflows/sanbi_cwltutorial/revcomp/revcomp.cwl

Branch/Commit ID: master
workflow graph wf_exec_paleocar.cwl

https://github.com/idaks/cwl_modeling.git

Path: yw_cwl_modeling/yw_cwl_parser_old/Examples/exec_paleocar/wf_exec_paleocar.cwl

Branch/Commit ID: master
workflow graph umi duplex alignment fastq workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/umi_duplex_alignment.cwl

Branch/Commit ID: c61af827113ebc41596aa839c65d21b4d2b0c8b6
workflow graph 03-map-pe.cwl

ATAC-seq 03 mapping - reads: PE

 https://github.com/Duke-GCB/GGR-cwl.git

Path: v1.0/ATAC-seq_pipeline/03-map-pe.cwl

Branch/Commit ID: v1.0.0
workflow graph RNA-Seq alignment with qc

https://github.com/litd/analysis-workflows.git

Path: definitions/pipelines/rnaseq4.cwl

Branch/Commit ID: master
workflow graph zip_and_index_vcf.cwl

This is a very simple workflow of two steps. It will zip an input VCF file and then index it. The zipped file and the index file will be in the workflow output.

https://github.com/ICGC-TCGA-PanCancer/pcawg-snv-indel-annotation.git

Path: zip_and_index_vcf.cwl

Branch/Commit ID: 1.0.0
workflow graph count-lines7-wf_v1_0.cwl

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/count-lines7-wf_v1_0.cwl

Branch/Commit ID: f14ff6a51d14430b4d02ee1d352a19644d231113