Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph picard_markduplicates

Mark duplicates

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/cwl/subworkflows/picard_markduplicates.cwl

Branch/Commit ID: 1.0.6
workflow graph Salmon quantification, FASTQ -> H5AD count matrix

https://github.com/hubmapconsortium/salmon-rnaseq.git

Path: steps/salmon-quantification.cwl

Branch/Commit ID: baee233
workflow graph gpas_gatk4.2.4.1_mutect2_tumor_only_workflow.cwl

https://github.com/NCI-GDC/gatk4_mutect2_cwl.git

Path: gatk4-mutect2-tumor-only-cwl/gpas_gatk4.2.4.1_mutect2_tumor_only_workflow.cwl

Branch/Commit ID: master
workflow graph GATK-Sub-Workflow-h3abionet-indel-no-vqsr.cwl

https://github.com/h3abionet/h3agatk.git

Path: workflows/GATK/GATK-Sub-Workflow-h3abionet-indel-no-vqsr.cwl

Branch/Commit ID: 1.0.1
workflow graph count-lines11-null-step-wf-noET.cwl

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/count-lines11-null-step-wf-noET.cwl

Branch/Commit ID: master
workflow graph main-somatic.cwl

https://github.com/FarahZKhan/bcbio_test_cwlprov.git

Path: somatic/somatic-workflow/main-somatic.cwl

Branch/Commit ID: master
workflow graph kmer_top_n_extract

https://github.com/ncbi/pgap.git

Path: task_types/tt_kmer_top_n_extract.cwl

Branch/Commit ID: dev
workflow graph kfdrc_sentieon_alignment_wf.cwl

https://github.com/kids-first/kf-alignment-workflow.git

Path: workflows/kfdrc_sentieon_alignment_wf.cwl

Branch/Commit ID: master
workflow graph echo-wf-default.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/echo-wf-default.cwl

Branch/Commit ID: main
workflow graph count-lines2-wf.cwl

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/count-lines2-wf.cwl

Branch/Commit ID: master