Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
emblem_textures.cwl
|
https://gitlab.com/unduthegun/stellaris-emblem-lab.git
Path: textures/emblem_textures.cwl Branch/Commit ID: master |
|
|
|
textures.cwl
Create emblem textures |
https://github.com/undu/stellaris-emblem-lab.git
Path: textures/textures.cwl Branch/Commit ID: cwl |
|
|
|
find_hotspots_in_normals.cwl
Workflow to find hotspot VAFs from duplex (for Tumor sample) and unfiltered (for Normal sample) pileups. These inputs are all required to be sorted in the same order: sample_ids patient_ids sample_classes unfiltered_pileups duplex_pileups |
https://github.com/mskcc/Innovation-Pipeline.git
Path: workflows/subworkflows/find_hotspots_in_normals.cwl Branch/Commit ID: master |
|
|
|
checkm_wnode
|
https://github.com/ncbi/pgap.git
Path: task_types/tt_checkm_wnode.cwl Branch/Commit ID: master |
|
|
|
retrieve metadata from Zenodo community
For a given Zenodo community, retrieve its repository records as Zenodo JSON and (eventually) schema.org JSON-LD and DataCite v4 XML. |
https://github.com/stain/ro-index-paper.git
Path: code/data-gathering/workflows/zenodo-records.cwl Branch/Commit ID: master |
|
|
|
rMATS_bam_packed.cwl
|
https://github.com/Xinglab/rmats-turbo.git
Path: cwl/rMATS_bam_packed.cwl Branch/Commit ID: master |
|
|
|
iwdr_with_nested_dirs.cwl
|
https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/iwdr_with_nested_dirs.cwl Branch/Commit ID: main |
|
|
|
Apply filters to VCF file
|
https://github.com/litd/analysis-workflows.git
Path: definitions/subworkflows/filter_vcf.cwl Branch/Commit ID: master |
|
|
|
pipeline.cwl
|
https://github.com/hubmapconsortium/ims-mxif-pipeline.git
Path: pipeline.cwl Branch/Commit ID: master |
|
|
|
Downsample and HaplotypeCaller
|
https://github.com/tmooney/cancer-genomics-workflow.git
Path: definitions/pipelines/downsample_and_recall.cwl Branch/Commit ID: downsample_and_recall |
