Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph create_snap_and_analyze.cwl

https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git

Path: create_snap_and_analyze.cwl

Branch/Commit ID: 5465f66

workflow graph wf-variantcall.cwl

https://github.com/bcbio/test_bcbio_cwl.git

Path: prealign/prealign-workflow/wf-variantcall.cwl

Branch/Commit ID: master

workflow graph count-lines14-wf.cwl

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/count-lines14-wf.cwl

Branch/Commit ID: master

workflow graph Single-cell Multiome ATAC and RNA-Seq Analyze

Single-cell Multiome ATAC and RNA-Seq Analyze Runs filtering, normalization, scaling, integration (optionally) and clustering for a single or aggregated single-cell Multiome ATAC and RNA-Seq datasets.

https://github.com/Barski-lab/sc-seq-analysis.git

Path: workflows/sc-multiome-analyze-wf.cwl

Branch/Commit ID: main

workflow graph inverse_fold.cwl

https://github.com/BioLM/biolm-cwl.git

Path: workflows/inverse_fold.cwl

Branch/Commit ID: main

workflow graph pipeline-pe-umis.cwl

STARR-seq pipeline - reads: PE

https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/STARR-seq_pipeline/pipeline-pe-umis.cwl

Branch/Commit ID: master

workflow graph env-wf3.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/env-wf3.cwl

Branch/Commit ID: master

workflow graph checker_workflow_wrapping_tool.cwl

This demonstrates how to wrap a \"real\" tool with a checker workflow that runs both the tool and a tool that performs verification of results

https://github.com/dockstore-testing/dockstore-workflow-md5sum-unified.git

Path: checker_workflow_wrapping_tool.cwl

Branch/Commit ID: 1.3.0

workflow graph WGS QC workflow

https://github.com/hamid58b/cancer-genomics-workflow.git

Path: qc/workflow_wgs.cwl

Branch/Commit ID: master

workflow graph workflow.cwl

https://github.com/NAL-i5K/Organism_Onboarding.git

Path: flow_dispatch/2blat/workflow.cwl

Branch/Commit ID: master