Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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dlr-s2-preproc.0.0.1.4-application.cwl#main
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https://gitlab.com/ellip-ogc-eo-apps/cwl.git
Path: fan-out/stage-in/dlr-s2-preproc.0.0.1.4-application.cwl Branch/Commit ID: master Packed ID: main |
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preprocess_vcf.cwl
This workflow will perform preprocessing steps on VCFs for the OxoG/Variantbam/Annotation workflow. |
https://github.com/ICGC-TCGA-PanCancer/pcawg-minibam.git
Path: preprocess_vcf.cwl Branch/Commit ID: develop |
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scRNA-seq pipeline using Salmon and Alevin
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https://github.com/hubmapconsortium/salmon-rnaseq.git
Path: pipeline.cwl Branch/Commit ID: d18fd49 |
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wf.cwl#SplitAndSubsample.cwl
SplitAndSubsample splits, subsamples and formats read files to be deposited in QualityFilter. |
https://github.com/aheinzel/tmp_rhapsody_for_cwl_vis.git
Path: wf.cwl Branch/Commit ID: main Packed ID: SplitAndSubsample.cwl |
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preprocess_vcf.cwl
This workflow will perform preprocessing steps on VCFs for the OxoG/Variantbam/Annotation workflow. |
https://github.com/ICGC-TCGA-PanCancer/pcawg-snv-indel-annotation.git
Path: preprocess_vcf.cwl Branch/Commit ID: develop |
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metaphlan_wfl.cwl
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https://github.com/stevetsa/Metaphlan-ISBCGC.git
Path: metaphlan_wfl.cwl Branch/Commit ID: master |
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fp_filter workflow
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https://github.com/ChrisMaherLab/PACT.git
Path: subworkflows/fp_filter.cwl Branch/Commit ID: master |
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contamination_foreign_chromosome
This workflow detect and remove foreign chromosome from a DNA fasta file |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/Contamination/contamination-foreign-chromosome-blastn.cwl Branch/Commit ID: master |
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Dockstore.cwl
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https://github.com/kathy-t/ghapps-single-workflow.git
Path: Dockstore.cwl Branch/Commit ID: annotated-tag-3 |
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count-lines6-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/count-lines6-wf.cwl Branch/Commit ID: main |
