Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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main.cwl
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https://github.com/kyusque/abmp_log_dump2pieda.git
Path: main.cwl Branch/Commit ID: master |
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cmsearch-multimodel.cwl
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https://github.com/farahzkhan/ebi-metagenomics-cwl.git
Path: workflows/cmsearch-multimodel.cwl Branch/Commit ID: master |
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minibam_sub_wf.cwl
This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow! |
https://github.com/ICGC-TCGA-PanCancer/pcawg-minibam.git
Path: minibam_sub_wf.cwl Branch/Commit ID: develop |
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Single-cell Multiome ATAC and RNA-Seq Alignment
Single-cell Multiome ATAC and RNA-Seq Alignment Runs Cell Ranger ARC Count to quantifies chromatin accessibility and gene expression from a single-cell Multiome ATAC and RNA-Seq library |
https://github.com/Barski-lab/sc-seq-analysis.git
Path: workflows/sc-multiome-align-wf.cwl Branch/Commit ID: main |
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fp_filter workflow
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https://github.com/litd/analysis-workflows.git
Path: definitions/subworkflows/fp_filter.cwl Branch/Commit ID: master |
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manta.cwl
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https://github.com/andurill/ACCESS-Pipeline.git
Path: workflows/subworkflows/manta.cwl Branch/Commit ID: master |
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gatk4_cohort_genotyping.cwl
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https://github.com/uc-cdis/genomel_pipelines.git
Path: genomel/cwl/workflows/variant_calling/gatk4_cohort_genotyping.cwl Branch/Commit ID: master |
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collate_unique_SSU_headers.cwl
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https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git
Path: tools/collate_unique_SSU_headers.cwl Branch/Commit ID: f993cad |
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GATK-Sub-Workflow-h3abionet-indel.cwl
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https://github.com/h3abionet/h3agatk.git
Path: workflows/GATK/GATK-Sub-Workflow-h3abionet-indel.cwl Branch/Commit ID: 1.0.1 |
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CNV_pipeline
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https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/cwl/abstract_workflow/abstract_workflow.cwl Branch/Commit ID: master |
