Explore Workflows

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/subworkflows/vcf_readcount_annotator.cwl

Branch/Commit ID: low-vaf

https://github.com/vdikan/cwl-gk-thermal.git

Path: cwl/gk-full-step-siesta.cwl

Branch/Commit ID: master

https://github.com/ska-sa/den.git

Path: cwl/workflows/flagging.cwl

Branch/Commit ID: kat7-test

https://github.com/idaks/cwl_modeling.git

Path: yw_cwl_modeling/yw_cwl_parser_old/Examples/workflow/wf_workflow.cwl

Branch/Commit ID: master

https://github.com/mr-c/cwltests.git

Path: cwl/packed.cwl

Branch/Commit ID: pack_test

Packed ID: workflow_mc.cwl

https://github.com/PMCC-BioinformaticsCore/janis-pipelines.git

Path: janis_pipelines/wgs_somatic/cwl/tools/vardictSomaticVariantCaller_v0_1_0.cwl

Branch/Commit ID: master

The BD Rhapsody™ assays are used to create sequencing libraries from single cell transcriptomes. After sequencing, the analysis pipeline takes the FASTQ files and a reference file for gene alignment. The pipeline generates molecular counts per cell, read counts per cell, metrics, and an alignment file.

https://github.com/longbow0/cwl.git

Path: v1.8/rhapsody_targeted_1.8.cwl

Branch/Commit ID: master

Packed ID: main

https://github.com/klimstef/testing-for-Haqseq.git

Path: cwl_s/preprocess.cwl

Branch/Commit ID: master

https://github.com/KBNLresearch/ochre.git

Path: ochre/cwl/sac-preprocess.cwl

Branch/Commit ID: master

Packed ID: align-texts-wf.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/tRNA_selection.cwl

Branch/Commit ID: 8515542