Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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chksum_for_a_corrupted_xam_file.cwl
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https://github.com/cancerit/workflow-seq-import.git
Path: cwls/chksum_for_a_corrupted_xam_file.cwl Branch/Commit ID: 0.5.1 |
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qa_check_subwf.cwl
This subworkflow will perform a QA check on the OxoG outputs. It will perform the QA check on a single tumour and it associated VCFs |
https://github.com/svonworl/OxoG-Dockstore-Tools.git
Path: qa_check_subwf.cwl Branch/Commit ID: develop |
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pipeline.cwl
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https://github.com/hubmapconsortium/spatial-transcriptomics-pipeline.git
Path: pipeline.cwl Branch/Commit ID: master |
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RNA-Seq alignment and transcript/gene abundance workflow
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https://github.com/genome/cancer-genomics-workflow.git
Path: rnaseq/workflow.cwl Branch/Commit ID: toil_compatibility |
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if_input_is_bz2_generate_md5sum_else_return_input_chksum_json.cwl
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https://github.com/cancerit/workflow-seq-import.git
Path: cwls/if_input_is_bz2_generate_md5sum_else_return_input_chksum_json.cwl Branch/Commit ID: master |
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kfdrc_bwamem_subwf.cwl
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https://github.com/cr-ste-justine/chujs-alignment-workflow.git
Path: workflows/kfdrc_bwamem_subwf.cwl Branch/Commit ID: dev |
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filter-pcr-artifacts.cwl
DNase-seq - map - Filter PCR Artifacts |
https://github.com/alexbarrera/GGR-cwl.git
Path: v1.0/map/filter-pcr-artifacts.cwl Branch/Commit ID: v1.0 |
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bwa-alignment.cwl
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https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/Alignments/bwa-alignment.cwl Branch/Commit ID: master |
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QIIME2 Step 1
QIIME2 Import and Demux Step 1 |
https://github.com/Duke-GCB/bespin-cwl.git
Path: packed/qiime2-step1-import-demux.cwl Branch/Commit ID: qiime2-workflow Packed ID: main |
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Functional analyis of sequences that match the 16S SSU
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/16S_taxonomic_analysis.cwl Branch/Commit ID: 930a2cf |
