Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph ST520106.cwl

https://github.com/Marco-Salvi/cwl-ro-crate.git

Path: ST520106.cwl

Branch/Commit ID: main
workflow graph multiome pipeline using Salmon and Alevin (HuBMAP scRNA-seq pipeline) and HuBMAP scATAC-seq pipeline

https://github.com/hubmapconsortium/multiome-rna-atac-pipeline.git

Path: pipeline.cwl

Branch/Commit ID: ff6c5c7
workflow graph functional analysis prediction with InterProScan

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/functional_analysis.cwl

Branch/Commit ID: f993cad
workflow graph output.cwl

https://github.com/CERIT-SC/fireprot.git

Path: output.cwl

Branch/Commit ID: master
workflow graph Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/subworkflows/pvacseq.cwl

Branch/Commit ID: low-vaf
workflow graph kallisto_wf_pe.cwl

https://github.com/pitagora-network/pitagora-cwl.git

Path: workflows/kallisto/paired_end/kallisto_wf_pe.cwl

Branch/Commit ID: master
workflow graph exomeseq.cwl#exomeseq-00-prepare-reference-data.cwl

https://github.com/Duke-GCB/bespin-cwl.git

Path: packed/exomeseq.cwl

Branch/Commit ID: qiime2-workflow-paired

Packed ID: exomeseq-00-prepare-reference-data.cwl
workflow graph run_total.cwl

https://github.com/rosafilgueira/DARE_SEISMO.git

Path: processing_elements/CWL_total_staged/run_total.cwl

Branch/Commit ID: master
workflow graph PGAP Pipeline

PGAP pipeline for external usage, powered via containers

 https://github.com/ncbi/pgap.git

Path: wf_common.cwl

Branch/Commit ID: dev
workflow graph raw-reads-1.cwl

https://github.com/EBI-Metagenomics/pipeline-v5.git

Path: workflows/conditionals/raw-reads/raw-reads-1.cwl

Branch/Commit ID: master