Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	metaphlan_wfl.cwl # Metaphlan-ISBCGC # Overview This is an example of how to add a description to a workflow. This uses markdown and can show things like images and links.	https://github.com/dockstore-testing/Metaphlan-ISBCGC.git Path: metaphlan_wfl.cwl Branch/Commit ID: master
	Bisulfite QC tools	https://github.com/tmooney/cancer-genomics-workflow.git Path: definitions/subworkflows/bisulfite_qc.cwl Branch/Commit ID: downsample_and_recall
	chksum_seqval_wf_paired_fq.cwl	https://github.com/cancerit/workflow-seq-import.git Path: cwls/chksum_seqval_wf_paired_fq.cwl Branch/Commit ID: develop
	EMG assembly for paired end Illumina	https://github.com/farahzkhan/ebi-metagenomics-cwl.git Path: workflows/emg-pipeline-v4-assembly-metaSPAdes.cwl Branch/Commit ID: master
	FASTQ Vector Removal This workflow convert fastq to multiple fasta files	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/File-formats/fastq-to-splitted-fasta.cwl Branch/Commit ID: master
	wf-variantcall.cwl	https://github.com/FarahZKhan/bcbio_test_cwlprov.git Path: somatic/somatic-workflow/wf-variantcall.cwl Branch/Commit ID: master
	realignment.cwl	https://github.com/mskcc/argos-cwl.git Path: modules/pair/realignment.cwl Branch/Commit ID: master
	rest_parallel.cwl	https://github.com/anandanlk/community_based_fl.git Path: decentralised_fl/CWL_Workflow/rest_parallel.cwl Branch/Commit ID: master
	Merge, annotate, and generate a TSV for SVs	https://github.com/tmooney/cancer-genomics-workflow.git Path: definitions/subworkflows/merge_svs.cwl Branch/Commit ID: downsample_and_recall
	Subworkflow that runs cnvkit in single sample mode and returns a vcf file	https://github.com/tmooney/cancer-genomics-workflow.git Path: definitions/subworkflows/cnvkit_single_sample.cwl Branch/Commit ID: downsample_and_recall

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