Explore Workflows

https://github.com/ncbi/pgap.git

Path: task_types/tt_kmer_cache_store.cwl

Branch/Commit ID: test

VDJ_GatherCalls collect the outputs from the multi-processed VDJ step into one file.

https://github.com/aheinzel/tmp_rhapsody_for_cwl_vis.git

Path: wf.cwl

Branch/Commit ID: main

Packed ID: VDJ_GatherCalls.cwl

https://github.com/fgomez02/analysis-workflows.git

Path: definitions/subworkflows/bam_to_bqsr.cwl

Branch/Commit ID: No_filters_detect_variants

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/inp_update_wf.cwl

Branch/Commit ID: main

Decompress mate pair fastq files

https://github.com/MG-RAST/amplicon.git

Path: CWL/Workflows/decompress_mate_pair.workflow.cwl

Branch/Commit ID: wilke/20180622

https://github.com/ncbi/pgap.git

Path: bacterial_orthology/wf_bacterial_orthology.cwl

Branch/Commit ID: dev

Validate camera time response.

https://github.com/gammasim/workflows.git

Path: workflows/ValidateCameraTimeResponse.cwl

Branch/Commit ID: main

Quality Control (raw data), Raw Data trimming and Quality Control (pre-processed)

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/cwl/subworkflows/trimmed_fastq.cwl

Branch/Commit ID: 1.0.5

https://github.com/rdocking/sgseq_cwl.git

Path: cwl/build_splice_variant_graphs_workflow.cwl

Branch/Commit ID: master

https://github.com/PMCC-BioinformaticsCore/janis-pipelines.git

Path: janis_pipelines/wgs_somatic/cwl/tools/vardictSomaticVariantCaller_v0_1_0.cwl

Branch/Commit ID: master