Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph checker-workflow-wrapping-workflow.cwl

This demonstrates how to wrap a \"real\" tool with a checker workflow that runs both the tool and a tool that performs verification of results

https://github.com/dockstore-testing/md5sum-checker.git

Path: checker-workflow-wrapping-workflow.cwl

Branch/Commit ID: develop
workflow graph steps.cwl

https://github.com/DimitraPanou/scRNAseq-cwl.git

Path: steps.cwl

Branch/Commit ID: b8e641c
workflow graph exome alignment with qc

https://github.com/MarkRobbo/workflows.git

Path: workflows/hello/exome_alignment_packed.cwl

Branch/Commit ID: master

Packed ID: main
workflow graph chksum_seqval_wf_paired_fq.cwl

https://github.com/cancerit/workflow-seq-import.git

Path: cwls/chksum_seqval_wf_paired_fq.cwl

Branch/Commit ID: 0.2.1
workflow graph EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-qc-paired.cwl

Branch/Commit ID: 930a2cf
workflow graph workflow_data.cwl

https://github.com/mr-c/cwltests.git

Path: cwl/workflow_data.cwl

Branch/Commit ID: pack_test
workflow graph preprocess-illumina.cwl

https://github.com/fjrmoreews/cwl-workflow-SARS-CoV-2.git

Path: PreProcessing/preprocess-illumina.cwl

Branch/Commit ID: master
workflow graph Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/subworkflows/pvacseq.cwl

Branch/Commit ID: downsample_and_recall
workflow graph baysorStaged.cwl

https://github.com/hubmapconsortium/spatial-transcriptomics-pipeline.git

Path: steps/baysorStaged.cwl

Branch/Commit ID: master
workflow graph haplotypecaller.cwl

https://github.com/uc-cdis/genomel_pipelines.git

Path: genomel/cwl/workflows/variant_calling/haplotypecaller.cwl

Branch/Commit ID: master