Explore Workflows

Assemble a set of reads using SKESA

https://github.com/ncbi/pgap.git

Path: assemble.cwl

Branch/Commit ID: test

https://github.com/hubmapconsortium/create-vis-symlink-archive.git

Path: pipeline.cwl

Branch/Commit ID: 6e55233

Alpha rarefaction plotting from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/

https://github.com/duke-gcb/bespin-cwl.git

Path: packed/qiime2-step3-alpha-analysis.cwl

Branch/Commit ID: qiime2-workflow-paired

Packed ID: qiime2-07-alpha-rarefaction.cwl

https://github.com/KBNLresearch/ochre.git

Path: ochre/cwl/ocrevaluation-performance-wf-pack.cwl

Branch/Commit ID: master

Packed ID: main

https://github.com/ncbi/pgap.git

Path: task_types/tt_blastn_wnode.cwl

Branch/Commit ID: master

https://github.com/Chi-CRL/cwl_check_workflow.git

Path: rhapsody_pipeline_2.0.cwl

Branch/Commit ID: main

Packed ID: VDJ_Assemble_and_Annotate_Contigs_IG.cwl

https://github.com/proteinswebteam/ebi-metagenomics-cwl.git

Path: workflows/emg-qc-paired.cwl

Branch/Commit ID: 5e82174

https://github.com/mr-c/cwltests.git

Path: cwl/wflow_all_mc.cwl

Branch/Commit ID: pack_test

This is a very simple workflow of two steps. It will zip an input VCF file and then index it. The zipped file and the index file will be in the workflow output.

https://github.com/svonworl/oxog-dockstore-tools.git

Path: zip_and_index_vcf.cwl

Branch/Commit ID: master

https://github.com/proteinswebteam/ebi-metagenomics-cwl.git

Path: workflows/orf_prediction.cwl

Branch/Commit ID: d4e5e53