Workflow: Get Proteins

Fetched 2024-07-19 12:25:14 GMT
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Inputs

ID Type Title Doc
taxid Integer
blastdb_dir Directory
tax_sql_file File
naming_sqlite File
uniColl_asn_cache Directory
all_order_specific_blastdb String[]

Steps

ID Runs Label Doc
File2Basenames
progs/file2basenames.cwl (ExpressionTool)
Get_Proteins_app
protein_alignment/bacterial_prot_src.cwl (CommandLineTool)
Get Proteins, bacterial_prot_src

Outputs

ID Type Label Doc
all_prots File
selected_blastdb String[]
universal_clusters File
Permalink: https://w3id.org/cwl/view/git/4ab36e0fe1b0ab18cad9d8f1c1f806ec316d7734/wf_bacterial_prot_src.cwl