Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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umi per-lane alignment subworkflow
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https://github.com/tmooney/cancer-genomics-workflow.git
Path: definitions/subworkflows/umi_alignment.cwl Branch/Commit ID: downsample_and_recall |
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SoupX (workflow) - an R package for the estimation and removal of cell free mRNA contamination
Wrapped in a workflow SoupX tool for easy access to Cell Ranger pipeline compressed outputs. |
https://github.com/Barski-lab/workflows.git
Path: tools/soupx-subworkflow.cwl Branch/Commit ID: master |
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md_launch.cwl
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https://github.com/douglowe/biobb_hpc_cwl_md_list.git
Path: md_launch.cwl Branch/Commit ID: main |
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import_include_test.cwl
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https://github.com/wshands/CWL1.2Test.git
Path: import_include_test.cwl Branch/Commit ID: develop |
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cmsearch-multimodel.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/cmsearch-multimodel.cwl Branch/Commit ID: 43d2fb8 |
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05-quantification.cwl
ChIP-seq - Quantification - samples: treatment |
https://github.com/alexbarrera/GGR-cwl.git
Path: v1.0/ChIP-seq_pipeline/05-quantification.cwl Branch/Commit ID: master |
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wf_split_self_and_idr.cwl
This workflow returns the reproducible number of split peaks given a single bam file and its size-matched input pair. This workflow splits the bam file first, but does not do anything to the input. |
https://github.com/YeoLab/merge_peaks.git
Path: cwl/wf_split_self_and_idr.cwl Branch/Commit ID: master |
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cond-with-defaults.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/conditionals/cond-with-defaults.cwl Branch/Commit ID: main |
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tRNA_selection.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/tRNA_selection.cwl Branch/Commit ID: a8abd0e |
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vecscreen_and_filter_workflow.cwl
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https://github.com/sapojnik/av_screen_x.git
Path: progs/vecscreen_and_filter_workflow.cwl Branch/Commit ID: main |
