Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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haplotypecaller.cwl
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Path: genomel/cwl/workflows/variant_calling/haplotypecaller.cwl Branch/Commit ID: master |
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pipeline.cwl
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Path: pipeline.cwl Branch/Commit ID: 20ea8da |
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post_freebayes.cwl
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Path: genomel/cwl/workflows/variant_calling/post_freebayes.cwl Branch/Commit ID: master |
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bwameth_trim_align_merge_sort_dedup.cwl
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Path: CWL/workflows/bwameth/tools/bwameth_trim_align_merge_sort_dedup.cwl Branch/Commit ID: main |
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rhapsody_pipeline_2.0.cwl#VDJ_Analyze_Reads_IG.cwl
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Path: rhapsody_pipeline_2.0.cwl Branch/Commit ID: main Packed ID: VDJ_Analyze_Reads_IG.cwl |
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atac_encode_samples.cwl
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Path: python/lib/MICGENT/data/cwl/atac_encode_samples.cwl Branch/Commit ID: master |
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record-output-wf.cwl
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Path: v1.0/v1.0/record-output-wf.cwl Branch/Commit ID: master |
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pcawg_minibam_wf.cwl
This workflow will run OxoG, variantbam, and annotate. Run this as `dockstore --script --debug workflow launch --descriptor cwl --local-entry --entry ./oxog_varbam_annotate_wf.cwl --json oxog_varbam_annotat_wf.input.json ` |
Path: pcawg_minibam_wf.cwl Branch/Commit ID: 1.0.0 |
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inspect.cwl
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Path: cwl/workflows/inspect.cwl Branch/Commit ID: kat7-test |
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qc_workflow_wo_waltz.cwl
This workflow is intended to be used to test the QC module, without having to run the long waltz step |
Path: workflows/QC/qc_workflow_wo_waltz.cwl Branch/Commit ID: master |
