Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph hipepipe.cwl

https://github.com/vuillaut/cookbooks.git

Path: CWL-pipeline/hipepipe.cwl

Branch/Commit ID: master
workflow graph gene_extractor.cwl

https://github.com/ngs-mstb/micgent.git

Path: python/lib/MICGENT/data/cwl/gene_extractor.cwl

Branch/Commit ID: master
workflow graph Identifies non-coding RNAs using Rfams covariance models

https://github.com/EBI-Metagenomics/pipeline-v5.git

Path: workflows/subworkflows/cmsearch-condition.cwl

Branch/Commit ID: master
workflow graph run_test.cwl

https://github.com/rosafilgueira/DARE_SEISMO.git

Path: specfem3d/specfem3d_test_input_cwl/run_test.cwl

Branch/Commit ID: master
workflow graph rRNA_selection.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/rRNA_selection.cwl

Branch/Commit ID: ca6ca613
workflow graph 02-trim-se.cwl

RNA-seq 02 trimming - reads: SE

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/RNA-seq_pipeline/02-trim-se.cwl

Branch/Commit ID: master
workflow graph fasta2taxa-plot

Input is a fasta file with n>1 samples, with sample id as sequence identifier prefix, and a sample id file. The workflow calls open otus and assigns taxa using greengenes. The output are taxa plots.

https://github.com/MG-RAST/qiime-pipeline.git

Path: CWL/Workflows/qiime/join-reads2reference2plot.cwl

Branch/Commit ID: master
workflow graph compile1.cwl#main

https://github.com/common-workflow-language/workflows.git

Path: workflows/compile/compile1.cwl

Branch/Commit ID: master

Packed ID: main
workflow graph make_search_pair_workflow.cwl

https://github.com/pvanheus/lukasa.git

Path: make_search_pair_workflow.cwl

Branch/Commit ID: master
workflow graph cmanalysis.cwl

https://github.com/CERIT-SC/fireprot.git

Path: cmanalysis.cwl

Branch/Commit ID: master