Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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qc_aggregator
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https://github.com/msk-access/qc_generation.git
Path: access_qc__packed.cwl Branch/Commit ID: develop Packed ID: qc_aggregator.cwl |
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revcomp.cwl
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https://github.com/puentesdiaz/workflows.git
Path: workflows/sanbi_cwltutorial/revcomp/revcomp.cwl Branch/Commit ID: master |
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Run genomic CMsearch (Rfam rRNA)
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https://github.com/ncbi/pgap.git
Path: bacterial_ncrna/wf_gcmsearch.cwl Branch/Commit ID: test |
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minibam_sub_wf.cwl
This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow! |
https://github.com/icgc-tcga-pancancer/pcawg-minibam.git
Path: minibam_sub_wf.cwl Branch/Commit ID: 1.0.0 |
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scRNA-seq pipeline using Salmon and Alevin
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https://github.com/hubmapconsortium/salmon-rnaseq.git
Path: pipeline.cwl Branch/Commit ID: d71be68 |
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HelloWorld-pipeline-020.cwl#hello_pipeline
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https://github.com/ILIAD-ocean-twin/application_package.git
Path: HelloWorld/files/HelloWorld-pipeline-020.cwl Branch/Commit ID: c0eb884bc34a1aae84d7885cb1a14708c4acae7a Packed ID: hello_pipeline |
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wf_get_peaks_trim_partial_scatter_se.cwl
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https://github.com/YeoLab/eclip.git
Path: cwl/wf_get_peaks_trim_partial_scatter_se.cwl Branch/Commit ID: master |
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workflow_demultiplexing.cwl
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https://git.wur.nl/unlock/cwl.git
Path: cwl/workflows/workflow_demultiplexing.cwl Branch/Commit ID: master |
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format-maf
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https://github.com/mskcc/roslin-variant.git
Path: setup/cwl/portal-formatting.cli/1.0.0/format-maf.cwl Branch/Commit ID: 2.4.x |
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Protein Ligand Complex MD Setup tutorial using BioExcel Building Blocks (biobb)
Common Workflow Language example that illustrate the process of setting up a simulation system containing a protein, step by step, using the BioExcel Building Blocks library (biobb). The particular example used is the Lysozyme protein (PDB code 1AKI). |
https://github.com/bioexcel/biobb-wf-md-setup-protein-cwl.git
Path: protein_md.cwl Branch/Commit ID: master |
