Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph birds.cwl

https://github.com/EOSC-LOFAR/presto-cwl.git

Path: birds.cwl

Branch/Commit ID: visualise
workflow graph Per-region pindel

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/pindel_cat.cwl

Branch/Commit ID: master
workflow graph collate_unique_SSU_headers.cwl

https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git

Path: tools/collate_unique_SSU_headers.cwl

Branch/Commit ID: 43d2fb8
workflow graph lobSTR-workflow.cwl

https://github.com/common-workflow-library/legacy.git

Path: workflows/lobSTR/lobSTR-workflow.cwl

Branch/Commit ID: lobstr-v1
workflow graph qiime2 create phylogenetic tree

Generate a tree for phylogenetic diversity analyses from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/

 https://github.com/duke-gcb/bespin-cwl.git

Path: packed/qiime2-step2-dada2-paired.cwl

Branch/Commit ID: qiime2-workflow-paired

Packed ID: qiime2-05-phylogeny.cwl
workflow graph exomeseq.cwl#exomeseq-03-organizedirectories.cwl

https://github.com/Duke-GCB/bespin-cwl.git

Path: packed/exomeseq.cwl

Branch/Commit ID: qiime2-workflow

Packed ID: exomeseq-03-organizedirectories.cwl
workflow graph EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-qc-paired.cwl

Branch/Commit ID: f993cad
workflow graph wf_demultiplex_se.cwl

This workflow takes in single-end reads, and performs the following steps in order: demux_se.cwl (does not actually demux for single end, but mirrors the paired-end processing protocol)

https://github.com/YeoLab/eclip.git

Path: cwl/wf_demultiplex_se.cwl

Branch/Commit ID: master
workflow graph LHCb MC workflow

This workflow is composed of 2 main steps that should generate 2 types of jobs: * MCSimulation (CommandLineTool): Gauss execution * MCReconstruction (Workflow): Boole, Moore, Brunel and DaVinci executions based on Gauss outputs

https://github.com/aldbr/dirac-cwl-proto.git

Path: test/workflows/lhcb/description.cwl

Branch/Commit ID: main
workflow graph 1st-workflow.cwl

https://github.com/common-workflow-language/user_guide.git

Path: src/_includes/cwl/workflows/1st-workflow.cwl

Branch/Commit ID: main