Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph star-cufflinks_wf_pe.cwl

https://github.com/pitagora-network/pitagora-cwl.git

Path: workflows/star-cufflinks/paired_end/star-cufflinks_wf_pe.cwl

Branch/Commit ID: master
workflow graph Whole_Exome-Seq.cwl

https://github.com/athenarc/whole-exome-seq.git

Path: workflows/Whole_Exome-Seq.cwl

Branch/Commit ID: main
workflow graph exomeseq-gatk4-03-organizedirectories.cwl

https://github.com/bespin-workflows/exomeseq-gatk4.git

Path: subworkflows/exomeseq-gatk4-03-organizedirectories.cwl

Branch/Commit ID: v2.0.3
workflow graph cnv_manta

CNV Manta calling

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/subworkflows/cnv_manta.cwl

Branch/Commit ID: 3bb03c9b
workflow graph bam_qc_stats

https://github.com/msk-access/qc_generation.git

Path: access_qc__packed.cwl

Branch/Commit ID: develop

Packed ID: bam_qc_stats.cwl
workflow graph EMG pipeline v3.0 (single end version)

https://github.com/farahzkhan/ebi-metagenomics-cwl.git

Path: workflows/emg-pipeline-v3.cwl

Branch/Commit ID: master
workflow graph minibam_sub_wf.cwl

This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow!

https://github.com/ICGC-TCGA-PanCancer/OxoG-Dockstore-Tools.git

Path: minibam_sub_wf.cwl

Branch/Commit ID: 1.0.0
workflow graph RNASelector as a CWL workflow

https://doi.org/10.1007/s12275-011-1213-z

 https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/rna-selector.cwl

Branch/Commit ID: 3f85843
workflow graph alignment_workflow.cwl

https://github.com/uc-cdis/topmed-cwl.git

Path: aligner/functional-equivalence/workflow/alignment_workflow.cwl

Branch/Commit ID: master
workflow graph wflow_all_mc.cwl

https://github.com/lukasheinrich/cwltests.git

Path: cwl/wflow_all_mc.cwl

Branch/Commit ID: master