Workflow: FragPipe: TMT Integrator and QC

Fetched 2024-07-19 01:57:43 GMT

This workflow step executes TMT-Integrator using the report tables generated by Philosopher. The program applies a series of statistical filters, and high-quality thresholds to filter the data. Summary report tables are created containing peptides, proteins, genes, and phosphosites (only for phospho-enriched data sets).

children parents
Workflow as SVG
  • Selected
  • Default Values
  • Nested Workflows
  • Tools
  • Inputs/Outputs


ID Type Title Doc
database File
psm_file File[]


There are no steps in this workflow


ID Type Label Doc
tmt_qc_report File (Optional) TMT QC Report
all_report_files File[] (Optional)