Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph RNA-Seq alignment with qc

https://github.com/litd/analysis-workflows.git

Path: definitions/pipelines/rnaseq4.cwl

Branch/Commit ID: master
workflow graph wf_trim_partial_and_map_se.cwl

This workflow takes in appropriate trimming params and demultiplexed reads, and performs the following steps in order: trimx1, trimx2, fastq-sort, filter repeat elements, fastq-sort, genomic mapping, sort alignment, index alignment, namesort, PCR dedup, sort alignment, index alignment

https://github.com/yeolab/eclip.git

Path: cwl/wf_trim_partial_and_map_se.cwl

Branch/Commit ID: master
workflow graph wf_run_exemplary_wf.cwl

https://github.com/BAMresearch/NFDI4IngScientificWorkflowRequirements.git

Path: exemplary_workflow/cwl/wf_run_exemplary_wf.cwl

Branch/Commit ID: main
workflow graph wf-loadContents3.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/wf-loadContents3.cwl

Branch/Commit ID: main
workflow graph Unaligned to aligned BAM

https://github.com/markrobbo/workflows.git

Path: workflows/hello/exome_alignment_packed.cwl

Branch/Commit ID: master

Packed ID: align.cwl
workflow graph kmer_cache_retrieve

https://github.com/ncbi/pgap.git

Path: task_types/tt_kmer_cache_retrieve.cwl

Branch/Commit ID: dev
workflow graph io-int-optional-wf.cwl

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/io-int-optional-wf.cwl

Branch/Commit ID: master
workflow graph EMG assembly for paired end Illumina

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-assembly.cwl

Branch/Commit ID: 0cf06f1
workflow graph cond-with-defaults.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/conditionals/cond-with-defaults.cwl

Branch/Commit ID: main
workflow graph preparation.cwl

https://github.com/CERIT-SC/fireprot.git

Path: preparation.cwl

Branch/Commit ID: master