Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	qc.cwl	https://github.com/kinow/pipeline-v5.git Path: workflows/conditionals/qc.cwl Branch/Commit ID: eosc-life-gos
	format-maf	https://github.com/mskcc/roslin-variant.git Path: setup/cwl/portal-formatting.cli/1.0.0/format-maf.cwl Branch/Commit ID: 2.4.x
	env-wf1.cwl	https://github.com/common-workflow-language/cwl-v1.1.git Path: tests/env-wf1.cwl Branch/Commit ID: main
	varscan somatic workflow	https://github.com/litd/analysis-workflows.git Path: definitions/subworkflows/varscan.cwl Branch/Commit ID: master
	SSU-from-tablehits.cwl	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: tools/SSU-from-tablehits.cwl Branch/Commit ID: 1b0851e
	EMG pipeline v3.0 (single end version)	https://github.com/farahzkhan/ebi-metagenomics-cwl.git Path: workflows/emg-pipeline-v3.cwl Branch/Commit ID: master
	bulk scRNA-seq pipeline using Salmon	https://github.com/hubmapconsortium/salmon-rnaseq.git Path: bulk-pipeline.cwl Branch/Commit ID: 8c435d7
	cluster_blastp_wnode and gpx_qdump combined	https://github.com/ncbi/pgap.git Path: task_types/tt_cluster_and_qdump.cwl Branch/Commit ID: dev
	FragPipe: TMT Integrator and QC This workflow step executes TMT-Integrator using the report tables generated by Philosopher. The program applies a series of statistical filters, and high-quality thresholds to filter the data. Summary report tables are created containing peptides, proteins, genes, and phosphosites (only for phospho-enriched data sets).	https://github.com/cwl-apps/fragpipe-proteomics-pipeline-tutorial.git Path: FragPipe-TMT-Integrator-and-QC/fragpipe-tmt-integrator-and-qc.cwl Branch/Commit ID: main
	intersect_intervals.cwl	https://github.com/wtsi-hgi/arvados-pipelines.git Path: cwl/workflows/intersect_intervals.cwl Branch/Commit ID: master