Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Hello World Puts a message into a file using echo	https://github.com/markrobbo/workflows.git Path: workflows/hello/hello-param.cwl Branch/Commit ID: master Packed ID: main
	bam_filtering BAM filtering	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/abstract_operations/subworkflows/bam_filtering.cwl Branch/Commit ID: master
	trimmed_fastq Quality Control (raw data), Raw Data trimming and Quality Control (pre-processed)	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/subworkflows/trimmed_fastq.cwl Branch/Commit ID: 1.0.9
	workflow.cwl	https://gitlab.ebrains.eu/sofiakar/yre-standardised-workflows.git Path: Workflows/PSD_workflow_smr_2/workflow.cwl Branch/Commit ID: poster
	scRNA-seq pipeline using Salmon and Alevin	https://github.com/hubmapconsortium/salmon-rnaseq.git Path: pipeline.cwl Branch/Commit ID: 1af8809
	Salmon quantification, FASTQ -> H5AD count matrix	https://github.com/hubmapconsortium/salmon-rnaseq.git Path: steps/salmon-quantification.cwl Branch/Commit ID: 69da10a
	tRNA_selection.cwl	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: tools/tRNA_selection.cwl Branch/Commit ID: 1b0851e
	word-mapping-test-files-wf.cwl#align-texts-wf.cwl	https://github.com/kbnlresearch/ochre.git Path: ochre/cwl/word-mapping-test-files-wf.cwl Branch/Commit ID: master Packed ID: align-texts-wf.cwl
	SVision-Pro workflow for structural variant detection in cancer samples A workflow that uses SVision-Pro to identify structural variants in tumor/normal paired samples from Oxford Nanopore Technology (ONT) long-read sequencing data.	https://github.com/bio-ontology-research-group/crc.git Path: workflow/main.cwl Branch/Commit ID: main
	workflow.cwl	https://github.com/NAL-i5K/Organism_Onboarding.git Path: flow_md5checksums/workflow.cwl Branch/Commit ID: master