Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph stdout-wf_v1_2.cwl

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/stdout-wf_v1_2.cwl

Branch/Commit ID: 02d6dbd3d48d50adfd4afb1f7d92e8a4284bcab9
workflow graph cavity-pipeline.cwl

https://github.com/MDoriana/prova-cwl.git

Path: cavity-pipeline.cwl

Branch/Commit ID: d82486823c1ad2d6d583669714e926a5ff41d654
workflow graph three_step_color.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/three_step_color.cwl

Branch/Commit ID: 544f108b906c179520b0a6d64c3c21d168b48fa2
workflow graph bact_get_kmer_reference

https://github.com/ncbi/pgap.git

Path: task_types/tt_bact_get_kmer_reference.cwl

Branch/Commit ID: a1851f7b930a08bb100e81329b24d0aaa7a644e8
workflow graph tec_and_amp.cwl

https://git.astron.nl/RD/LINC.git

Path: workflows/linc_target/tec_and_amp.cwl

Branch/Commit ID: cff7fed6aa41fb1ccacd5235dec289b4e7ef70eb
workflow graph cache_test_workflow.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/cache_test_workflow.cwl

Branch/Commit ID: 544f108b906c179520b0a6d64c3c21d168b48fa2
workflow graph scatter-wf1_v1_0.cwl

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/scatter-wf1_v1_0.cwl

Branch/Commit ID: 02d6dbd3d48d50adfd4afb1f7d92e8a4284bcab9
workflow graph fasta2taxa-plot

Input is a fasta file with n>1 samples, with sample id as sequence identifier prefix, and a sample id file. The workflow calls open otus and assigns taxa using greengenes. The output are taxa plots.

https://github.com/MG-RAST/qiime-pipeline.git

Path: CWL/Workflows/qiime/join-reads2plot.cwl

Branch/Commit ID: ea3f99c0fc58d161e068bd5077c362768e534b92
workflow graph gp_makeblastdb

https://github.com/ncbi/pgap.git

Path: progs/gp_makeblastdb.cwl

Branch/Commit ID: 16952d6db8571ca56cbf7bd63e11c939945bc145
workflow graph screen out taxa

Remove sequences which align against a reference set using bowtie2. The references are preformatted (index files)

 https://github.com/MG-RAST/pipeline.git

Path: CWL/Workflows/organism-screening.workflow.cwl

Branch/Commit ID: 8698ae242c1f7addf0003663192bb43d7cd36d09