Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph exomeseq-gatk4-03-organizedirectories.cwl

https://github.com/bespin-workflows/exomeseq-gatk4.git

Path: subworkflows/exomeseq-gatk4-03-organizedirectories.cwl

Branch/Commit ID: v2.0.3
workflow graph cnv_codex

CNV CODEX calling

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/cwl/abstract_operations/subworkflows/cnv_codex.cwl

Branch/Commit ID: master
workflow graph find downloadable files in zenodo community

For a given Zenodo community, retrieve a list of all its downloadable files

https://github.com/stain/ro-index-paper.git

Path: code/data-gathering/workflows/zenodo-community-links.cwl

Branch/Commit ID: master
workflow graph 1st-workflow.cwl

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/examples/1st-workflow.cwl

Branch/Commit ID: master
workflow graph 02-trim-se.cwl

RNA-seq 02 trimming - reads: SE

 https://github.com/Duke-GCB/GGR-cwl.git

Path: v1.0/RNA-seq_pipeline/02-trim-se.cwl

Branch/Commit ID: master
workflow graph A workflow that aligns a fasta file and provides statistics on the SAM file

A workflow that aligns a fasta file and provides statistics on the SAM file

 https://github.com/dockstore/bcc2020-training.git

Path: cwl-training/exercise3/solution/align_and_metrics.cwl

Branch/Commit ID: master
workflow graph TransDecoder 2 step workflow, running TransDecoder.LongOrfs (step 1) followed by TransDecoder.Predict (step2)

https://github.com/mscheremetjew/workflow-is-cwl.git

Path: workflows/TransDecoder-v5-wf-2steps.cwl

Branch/Commit ID: assembly
workflow graph Detect Variants workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/detect_variants.cwl

Branch/Commit ID: master
workflow graph Detect Docm variants

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/docm_cle.cwl

Branch/Commit ID: master
workflow graph sum-wf.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/sum-wf.cwl

Branch/Commit ID: main