Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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contamination_foreign_chromosome
This workflow detect and remove foreign chromosome from a DNA fasta file |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/Contamination/contamination-foreign-chromosome-blastn.cwl Branch/Commit ID: 590ed6c9803ba670411c48650bc24deef7863925 |
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bact_get_kmer_reference
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https://github.com/ncbi/pgap.git
Path: task_types/tt_bact_get_kmer_reference.cwl Branch/Commit ID: 16952d6db8571ca56cbf7bd63e11c939945bc145 |
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scatter-wf2_v1_2.cwl
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https://github.com/common-workflow-language/cwl-utils.git
Path: testdata/scatter-wf2_v1_2.cwl Branch/Commit ID: 02d6dbd3d48d50adfd4afb1f7d92e8a4284bcab9 |
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fastq_contamination_cleanup
This workflow detect and remove contamination from a DNA fasta file |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/Contamination/fastq-contamination-cleanup.cwl Branch/Commit ID: 590ed6c9803ba670411c48650bc24deef7863925 |
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merge-bam-parallel
This workflow merge BAM files per condition in parallel |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/File-formats/merge-bam-parallel.cwl Branch/Commit ID: 590ed6c9803ba670411c48650bc24deef7863925 |
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Nested workflow example
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/double-nested.cwl Branch/Commit ID: 9b603df77aeb586d122daa2c6c6b1ae40cd54f21 |
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sec-wf-out.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/sec-wf-out.cwl Branch/Commit ID: 9b603df77aeb586d122daa2c6c6b1ae40cd54f21 |
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HBA_target_VLBI.cwl
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https://git.astron.nl/eosc/prefactor3-cwl.git
Path: workflows/HBA_target_VLBI.cwl Branch/Commit ID: dc7a4f725f6e8dde49b0b1db2e3fbde7fb19990a |
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packed_no_main.cwl#collision
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/packed_no_main.cwl Branch/Commit ID: 9b603df77aeb586d122daa2c6c6b1ae40cd54f21 Packed ID: collision |
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cond-single-source-wf-005.1.cwl
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https://github.com/common-workflow-language/cwl-utils.git
Path: testdata/cond-single-source-wf-005.1.cwl Branch/Commit ID: 02d6dbd3d48d50adfd4afb1f7d92e8a4284bcab9 |
