Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph env-wf3.cwl

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/env-wf3.cwl

Branch/Commit ID: master
workflow graph diamond proteinworkflow

\"This workflow performs diamond protein alignment process for predicted protein sequences. It executes 2 processes: diamond index creation and diamond alignment. related CWL file: ./Tools/09_diamond_index.cwl ./Tools/11_diamond_uniprot_alignment.cwl ./Tools/11_diamond_uniprot_filter1.cwl ./Tools/11_diamond_uniprot_filter2.cwl\"

https://github.com/RyoMameda/workflow_cwl.git

Path: Workflow/diamond_protein_ssw.cwl

Branch/Commit ID: main
workflow graph chip-seq-alignment.cwl

https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/ChIP-Seq/chip-seq-alignment.cwl

Branch/Commit ID: master
workflow graph orgaquant_wf.cwl

https://github.com/AlexanderSenf/orgaquant.git

Path: orgaquant_wf.cwl

Branch/Commit ID: 1.1
workflow graph Single-cell Multiome ATAC and RNA-Seq Alignment

Single-cell Multiome ATAC and RNA-Seq Alignment Runs Cell Ranger ARC Count to quantifies chromatin accessibility and gene expression from a single-cell Multiome ATAC and RNA-Seq library

 https://github.com/Barski-lab/sc-seq-analysis.git

Path: workflows/sc-multiome-align-wf.cwl

Branch/Commit ID: main
workflow graph LSU-from-tablehits.cwl

https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git

Path: tools/LSU-from-tablehits.cwl

Branch/Commit ID: 43d2fb8
workflow graph EMG pipeline v3.0 (single end version)

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-pipeline-v3.cwl

Branch/Commit ID: 5833078
workflow graph Detect Variants workflow for nonhuman WGS pipeline

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/pipelines/detect_variants_wgs_nonhuman.cwl

Branch/Commit ID: low-vaf
workflow graph variant-calling-pair.cwl

https://github.com/mskcc/argos-cwl.git

Path: modules/pair/variant-calling-pair.cwl

Branch/Commit ID: master
workflow graph bgzip and index VCF

https://github.com/hamid58b/cancer-genomics-workflow.git

Path: varscan/bgzip_and_index.cwl

Branch/Commit ID: master