Explore Workflows
View already parsed workflows here or click here to add your own
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myAIWorkflow2.cwl
This CWL workflow outlines the steps for setting up and executing an experiment based on objectives, SOP references, parameters, and experimental design. |
Path: myAIWorkflow2.cwl Branch/Commit ID: main |
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functional_annotation.cwl
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Path: workflows/subworkflows/assembly/functional_annotation.cwl Branch/Commit ID: master |
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1st-workflow.cwl
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Path: src/_includes/cwl/workflows/1st-workflow.cwl Branch/Commit ID: main |
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EMG pipeline v3.0 (paired end version)
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Path: workflows/emg-pipeline-v3-paired.cwl Branch/Commit ID: fa86fce |
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bwameth_mulitlib_start_with_trimmed.cwl
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Path: workflows/bwameth/bwameth_mulitlib_start_with_trimmed.cwl Branch/Commit ID: main |
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WGS and MT analysis for fastq files
rna / protein - qc, preprocess, filter, annotation, index, abundance |
Path: CWL/Workflows/wgs-noscreen-fastq.workflow.cwl Branch/Commit ID: master |
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md5sum-workflow.cwl
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Path: md5sum/md5sum-workflow.cwl Branch/Commit ID: 1.0.0 |
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Single-cell Multiome ATAC and RNA-Seq Analyze
Single-cell Multiome ATAC and RNA-Seq Analyze Runs filtering, normalization, scaling, integration (optionally) and clustering for a single or aggregated single-cell Multiome ATAC and RNA-Seq datasets. |
Path: workflows/sc-multiome-analyze-wf.cwl Branch/Commit ID: main |
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Chunked version of phmmer-v3.2.cwl
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Path: workflows/phmmer-v3.2-chunked-wf.cwl Branch/Commit ID: master |
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BlastP_RBH_workflow
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Path: blast-pipelines/blast_workflow.cwl Branch/Commit ID: master |
