Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph RNA-Seq alignment and transcript/gene abundance workflow

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/pipelines/rnaseq.cwl

Branch/Commit ID: low-vaf
workflow graph main.cwl

https://github.com/kyusque/ajf_man2hybrid.git

Path: main.cwl

Branch/Commit ID: main
workflow graph m2a_without_transfer_learning.cwl

https://github.com/chenlab-sj/M2A.git

Path: cwl/m2a_without_transfer_learning.cwl

Branch/Commit ID: master
workflow graph EMG pipeline v3.0 (paired end version)

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-pipeline-v3-paired.cwl

Branch/Commit ID: 135976d
workflow graph workflow.cwl

Implementing bamqc over and over again to get an idea of how easy or hard it is for a beginner to implement a basic workflow in different workflow systems.

https://github.com/garyluu/one-workflow-many-ways.git

Path: cwl/workflow.cwl

Branch/Commit ID: master
workflow graph Chipseq alignment with qc and creating homer tag directory

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/chipseq.cwl

Branch/Commit ID: master
workflow graph chksum_for_corrupted_fastq_files.cwl

https://github.com/cancerit/workflow-seq-import.git

Path: cwls/chksum_for_corrupted_fastq_files.cwl

Branch/Commit ID: master
workflow graph HS Metrics workflow

https://github.com/litd/analysis-workflows.git

Path: definitions/subworkflows/hs_metrics.cwl

Branch/Commit ID: master
workflow graph Per-region pindel

https://github.com/litd/analysis-workflows.git

Path: definitions/subworkflows/pindel_cat.cwl

Branch/Commit ID: master
workflow graph process VCF workflow

https://github.com/mnneveau/cancer-genomics-workflow.git

Path: strelka/process_vcf.cwl

Branch/Commit ID: master