Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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mutect panel-of-normals workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/panel_of_normals.cwl Branch/Commit ID: efbbe5ed51f6ac583e87a348785c72818a33f56e |
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Create Genomic Collection for Bacterial Pipeline
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https://github.com/ncbi/pgap.git
Path: genomic_source/wf_genomic_source.cwl Branch/Commit ID: 89839cdb0a3216024f5f97af5581ae9753de0496 |
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bulk scRNA-seq pipeline using Salmon
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https://github.com/hubmapconsortium/salmon-rnaseq.git
Path: bulk-pipeline.cwl Branch/Commit ID: 45195f760ce38dcbb59d1bd6bd32871fcda670f0 |
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sec-wf-out.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/sec-wf-out.cwl Branch/Commit ID: cd779a90a4336563dcf13795111f502372c6af83 |
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Salmon quantification, FASTQ -> H5AD count matrix
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https://github.com/hubmapconsortium/salmon-rnaseq.git
Path: steps/salmon-quantification.cwl Branch/Commit ID: 45195f760ce38dcbb59d1bd6bd32871fcda670f0 |
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bact_get_kmer_reference
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https://github.com/ncbi/pgap.git
Path: task_types/tt_bact_get_kmer_reference.cwl Branch/Commit ID: 681555881cbdf95a1f4c29f6dc272eb6ca8e4d60 |
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RNA-Seq alignment and transcript/gene abundance workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/rnaseq.cwl Branch/Commit ID: 27dcb1ae121be6a23057b74332b8c752ea425735 |
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Nested workflow example
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/double-nested.cwl Branch/Commit ID: 60dfe96952119f472a57524c19ed214e831b21a4 |
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HBA_calibrator.cwl
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https://git.astron.nl/eosc/prefactor3-cwl.git
Path: workflows/HBA_calibrator.cwl Branch/Commit ID: 0601b0801bc238c464e954803c16b48bd7e6b14e |
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Nested workflow example
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/double-nested.cwl Branch/Commit ID: 80e263dce62ab113ab841e7cd99f5c20d5b24a96 |
