Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph workflow_data.cwl

https://github.com/lukasheinrich/cwltests.git

Path: cwl/workflow_data.cwl

Branch/Commit ID: master
workflow graph collate_unique_SSU_headers.cwl

https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git

Path: tools/collate_unique_SSU_headers.cwl

Branch/Commit ID: 5833078
workflow graph scRNA-seq pipeline using Salmon and Alevin

https://github.com/hubmapconsortium/salmon-rnaseq.git

Path: pipeline.cwl

Branch/Commit ID: ada7831
workflow graph EMG pipeline v3.0 (paired end version)

https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git

Path: workflows/emg-pipeline-v3-paired.cwl

Branch/Commit ID: master
workflow graph create_diploid_genome.cwl

Diploid Genome Creation Workflow

 https://github.com/Sage-Bionetworks/rnaseqSim.git

Path: workflow/create_diploid_genome.cwl

Branch/Commit ID: master
workflow graph qc_generator

https://github.com/msk-access/qc_generation.git

Path: access_qc__packed.cwl

Branch/Commit ID: develop

Packed ID: qc_generator.cwl
workflow graph rRNA_selection.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/rRNA_selection.cwl

Branch/Commit ID: ca6ca613
workflow graph Functional analyis of sequences that match the 16S SSU

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/16S_taxonomic_analysis.cwl

Branch/Commit ID: 5833078
workflow graph bams2gvcf.woBQSR_female.cwl

https://github.com/ddbj/human-reseq.git

Path: Workflows/bams2gvcf.woBQSR_female.cwl

Branch/Commit ID: master
workflow graph snp_callers_workflow.cwl

A workflow for running MuSe, MuTect, SomaticSniper, and Pindel. See [the github repository](https://github.com/BD2KGenomics/dockstore_workflow_snps) for details.

https://github.com/bd2kgenomics/dockstore_workflow_snps.git

Path: snp_callers_workflow.cwl

Branch/Commit ID: master