Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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qc-basic.workflow.cwl
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https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/qc-basic.workflow.cwl Branch/Commit ID: 2addcde0f4c1c8547f7f3906c2523cded23e9869 |
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exome alignment and germline variant detection, with optitype for HLA typing
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/germline_exome_hla_typing.cwl Branch/Commit ID: 195b4ab487c939eb32a55d9f78bc1befd100caae |
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mutect panel-of-normals workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/panel_of_normals.cwl Branch/Commit ID: 72e0bdc1ec449d86df4534132e9a30ad7e9b8afd |
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spades_pipeline.cwl
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https://github.com/EBI-Metagenomics/CWL-assembly.git
Path: cwl/spades_pipeline.cwl Branch/Commit ID: 7d4e5f321eef009419f8eb49661e21d432e82537 |
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Chipseq alignment for mouse with qc and creating homer tag directory
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/chipseq_alignment_mouse.cwl Branch/Commit ID: 28d1065759cbd389594ee33b41fd1103ced5436d |
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cond-single-source-wf-005.1.cwl
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https://github.com/common-workflow-language/cwl-utils.git
Path: testdata/cond-single-source-wf-005.1.cwl Branch/Commit ID: 15c8467d6d3c31a95ccc682095cf34aad125ca8c |
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canine_lancet_module.cwl
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https://github.com/d3b-center/canine-dev.git
Path: subworkflows/canine_lancet_module.cwl Branch/Commit ID: 7da5645975f5712362cce7908d2ab138e05876fb |
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Seed Protein Alignments I
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https://github.com/ncbi-gpipe/pgap.git
Path: protein_alignment/wf_seed_1.cwl Branch/Commit ID: e77d435a1e569d5bbcb20c046632ccf93be004a7 |
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gcaccess_from_list
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https://github.com/ncbi/pgap.git
Path: task_types/tt_gcaccess_from_list.cwl Branch/Commit ID: b174aec5dba5524367061a2c60472c318430f4f5 |
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metabarcode (gene amplicon) analysis for fastq files
protein - qc, preprocess, annotation, index, abundance |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/metabarcode-fasta.workflow.cwl Branch/Commit ID: 4e4d2e674bde612f98f2b0370445f8b2a47587df |
