Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Run taxonomic classification, create OTU table and krona visualisation

https://github.com/EBI-Metagenomics/pipeline-v5.git

Path: workflows/subworkflows/classify-otu-visualise.cwl

Branch/Commit ID: master
workflow graph freebayes.cwl

https://github.com/uc-cdis/genomel_pipelines.git

Path: genomel/cwl/workflows/variant_calling/freebayes.cwl

Branch/Commit ID: master
workflow graph Detect Variants workflow

https://github.com/litd/analysis-workflows.git

Path: definitions/pipelines/detect_variants.cwl

Branch/Commit ID: master
workflow graph umi duplex alignment workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/duplex_alignment.cwl

Branch/Commit ID: e59c77629936fad069007ba642cad49fef7ad29f
workflow graph wrapper.cwl

https://gitlab.com/ellip-ogc-eo-apps/cwl.git

Path: fan-out/stage-in/wrapper.cwl

Branch/Commit ID: master
workflow graph functional analysis prediction with InterProScan

https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git

Path: workflows/functional_analysis.cwl

Branch/Commit ID: 5833078
workflow graph count-lines3-wf.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/count-lines3-wf.cwl

Branch/Commit ID: master
workflow graph myAIWorkflow3.cwl

This CWL workflow outlines the steps for setting up and executing an experiment based on objectives, SOP references, parameters, and experimental design. Version: 1.0 Description: Workflow for executing and tracking experiments. Includes validation and logging steps.

https://github.com/pascmont/cwltest.git

Path: myAIWorkflow3.cwl

Branch/Commit ID: main
workflow graph collapsed_fastq_to_bam.cwl

https://github.com/mskcc/ACCESS-Pipeline.git

Path: workflows/marianas/collapsed_fastq_to_bam.cwl

Branch/Commit ID: master
workflow graph Decompress

Decompress mate pair fastq files

 https://github.com/MG-RAST/amplicon.git

Path: CWL/Workflows/decompress_mate_pair.workflow.cwl

Branch/Commit ID: wilke/20180622