Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph mixed_library_metrics.cwl

https://github.com/denis-yuen/gdc-dnaseq-cwl.git

Path: workflows/dnaseq/mixed_library_metrics.cwl

Branch/Commit ID: master
workflow graph cnv_exomedepth

CNV ExomeDepth calling

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/cwl/subworkflows/cnv_exome_depth.cwl

Branch/Commit ID: 1.1.3
workflow graph bwa_index

Modified from https://github.com/kids-first/kf-somatic-workflow/blob/master/sub_workflows/prepare_reference.cwl

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/cwl/subworkflows/bwa_index.cwl

Branch/Commit ID: 1.1.3
workflow graph 5S-from-tablehits.cwl

https://github.com/farahzkhan/ebi-metagenomics-cwl.git

Path: tools/5S-from-tablehits.cwl

Branch/Commit ID: master
workflow graph cnv_codex

CNV CODEX calling

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/cwl/subworkflows/cnv_codex.cwl

Branch/Commit ID: 1.0.6
workflow graph EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.

https://github.com/proteinswebteam/ebi-metagenomics-cwl.git

Path: workflows/emg-qc-single.cwl

Branch/Commit ID: master
workflow graph count-lines4-wf.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/count-lines4-wf.cwl

Branch/Commit ID: main
workflow graph bwa_mem

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/cwl/subworkflows/bwa_mem.cwl

Branch/Commit ID: 1.1.3
workflow graph Varscan Workflow

https://github.com/genome/cancer-genomics-workflow.git

Path: varscan/germline_workflow.cwl

Branch/Commit ID: toil_compatibility
workflow graph wf-loadContents4.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/wf-loadContents4.cwl

Branch/Commit ID: master