Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Unaligned BAM to BQSR and VCF
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_bqsr.cwl Branch/Commit ID: 70e05adeda8b3b4c77b8947266684ce4305db6ac |
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selfcal_targ_hba.cwl
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https://git.astron.nl/RD/LINC.git
Path: workflows/linc_target/selfcal_targ_hba.cwl Branch/Commit ID: 4d7bd88fee5430bda4270a825b18b93c57596dfc |
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amplitude.cwl
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https://git.astron.nl/RD/LINC.git
Path: workflows/linc_target/amplitude.cwl Branch/Commit ID: 4d7bd88fee5430bda4270a825b18b93c57596dfc |
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trim-rnaseq-se-dutp.cwl
Runs RNA-Seq dUTP BioWardrobe basic analysis with strand specific single-end data file. |
https://github.com/Barski-lab/workflows.git
Path: workflows/trim-rnaseq-se-dutp.cwl Branch/Commit ID: 9a03dbe8829ca649814d9c8bd11fe3a673750a95 |
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allele-process-reference.cwl
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https://github.com/Barski-lab/workflows.git
Path: subworkflows/allele-process-reference.cwl Branch/Commit ID: 0a8a3a654518547047ca4c975795459ade904fe2 |
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Transcriptome assembly workflow (paired-end version)
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https://github.com/mscheremetjew/workflow-is-cwl.git
Path: workflows/TranscriptomeAssembly-wf.paired-end.cwl Branch/Commit ID: 11cba46ea263315d4d66e86819718fa157e927b1 |
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readgroup_fastq_pe.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/readgroup_fastq_pe.cwl Branch/Commit ID: b2f7a697e08220234062a9cf558ba169d255b4a4 |
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Detect Variants workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/detect_variants_mouse.cwl Branch/Commit ID: c6bbd4cdd612b3b5cc6e9000df4800c21e192bf5 |
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amplitude.cwl
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https://git.astron.nl/RD/LINC.git
Path: workflows/linc_target/amplitude.cwl Branch/Commit ID: b139045507381d9fdaad02d719c7b9bfe809fec8 |
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RNA-Seq alignment and transcript/gene abundance workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/rnaseq.cwl Branch/Commit ID: ad65dc1dfff9afa5077f498b85e699716c47f6cb |
