Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph lobSTR-workflow.cwl

https://github.com/common-workflow-language/workflows.git

Path: workflows/lobSTR/lobSTR-workflow.cwl

Branch/Commit ID: 17b65ea19d81527090fded62ffa0e
workflow graph Uses Bruker TopSpin to convert a zipped NMR data directory to JCAMP-DX

https://github.com/NFDI4Chem/formaTAPIRest.git

Path: cwl/zipped2bruker2jcamp.cwl

Branch/Commit ID: main
workflow graph inpdir_update_wf.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/inpdir_update_wf.cwl

Branch/Commit ID: main
workflow graph kf_alignment_fq_input_wf.cwl

https://github.com/cr-ste-justine/chujs-alignment-workflow.git

Path: workflows/kf_alignment_fq_input_wf.cwl

Branch/Commit ID: dev
workflow graph SetArrayElementCoordinates

Transform array element coordinates into the coordinate system required by the simulation pipeline (i.e., CORSIKA system).

 https://github.com/gammasim/workflows.git

Path: workflows/SetArrayElementCoordinates.cwl

Branch/Commit ID: main
workflow graph packed.cwl#wflow_all_mc.cwl

https://github.com/mr-c/cwltests.git

Path: cwl/packed.cwl

Branch/Commit ID: pack_test

Packed ID: wflow_all_mc.cwl
workflow graph scRNA-seq pipeline using Salmon and Alevin

https://github.com/hubmapconsortium/salmon-rnaseq.git

Path: pipeline.cwl

Branch/Commit ID: 8a00eb4
workflow graph standard_pipeline.cwl

This is a workflow to go from UMI-tagged fastqs to standard bams. It does not include collapsing, or QC It does include modules 1 and 2

https://github.com/andurill/ACCESS-Pipeline.git

Path: workflows/standard_pipeline.cwl

Branch/Commit ID: master
workflow graph chksum_seqval_wf_interleaved_fq.cwl

https://github.com/cancerit/workflow-seq-import.git

Path: cwls/chksum_seqval_wf_interleaved_fq.cwl

Branch/Commit ID: develop
workflow graph count-lines1-wf.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/count-lines1-wf.cwl

Branch/Commit ID: master