Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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phaseup-concat.cwl
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https://git.astron.nl/RD/VLBI-cwl.git
Path: workflows/phaseup-concat.cwl Branch/Commit ID: df8ae840c8223132825340b439393bc39ccfa2c5 |
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Unaligned BAM to BQSR and VCF
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_bqsr.cwl Branch/Commit ID: f90b39e1b05e9bb37079b09f337f7e7ba5027f99 |
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align_sort_sa
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https://github.com/ncbi/pgap.git
Path: task_types/tt_align_sort_sa.cwl Branch/Commit ID: 50d161364e2859ed5c95ef07c9f7234f1431cf31 |
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Apply filters to VCF file
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/filter_vcf.cwl Branch/Commit ID: c6bbd4cdd612b3b5cc6e9000df4800c21e192bf5 |
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umi molecular alignment workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/molecular_qc.cwl Branch/Commit ID: 7b4b489474473c3d2d992a838b89632c2b97dc2c |
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HBA_calibrator.cwl
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https://git.astron.nl/eosc/prefactor3-cwl.git
Path: workflows/HBA_calibrator.cwl Branch/Commit ID: 0c5bd78e3f2d08564f5c9a563bcc8bb7704e6202 |
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wgs alignment and germline variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/germline_wgs.cwl Branch/Commit ID: 026bba9511561246ad65458f0f55c88cead26fbd |
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kmer_ref_compare_wnode
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_ref_compare_wnode.cwl Branch/Commit ID: 9bf0dc70af47b5c37fe6cbf3442cd52ff8f8025d |
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Salmon quantification, FASTQ -> H5AD count matrix
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https://github.com/hubmapconsortium/multiome-rna-atac-pipeline.git
Path: salmon-rnaseq/steps/salmon-quantification.cwl Branch/Commit ID: ff6c5c7e4c88c00c6118ca2e2aa8848cd565c8e4 |
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inp_update_wf.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/inp_update_wf.cwl Branch/Commit ID: 6397014050177074c9ccd0d771577f7fa9f728a3 |
