Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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step_valuefrom5_wf_with_id_v1_1.cwl
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https://github.com/common-workflow-language/cwl-utils.git
Path: testdata/step_valuefrom5_wf_with_id_v1_1.cwl Branch/Commit ID: 139c64b55f7693d22e6646b8afe585f90da11dcb |
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Bisulfite alignment and QC
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/bisulfite.cwl Branch/Commit ID: 27aa22e6f5d2fca75abca42d52867259fd0725b9 |
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heatmap-prepare.cwl
Workflow runs homer-make-tag-directory.cwl tool using scatter for the following inputs - bam_file - fragment_size - total_reads `dotproduct` is used as a `scatterMethod`, so one element will be taken from each array to construct each job: 1) bam_file[0] fragment_size[0] total_reads[0] 2) bam_file[1] fragment_size[1] total_reads[1] ... N) bam_file[N] fragment_size[N] total_reads[N] `bam_file`, `fragment_size` and `total_reads` arrays should have the identical order. |
https://github.com/Barski-lab/workflows.git
Path: tools/heatmap-prepare.cwl Branch/Commit ID: 50959c0cceb0c57b4290900c5e89eac1127d3e2f |
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rRNA_selection.cwl
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https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git
Path: tools/rRNA_selection.cwl Branch/Commit ID: 135976dc51f067b76db0a923a832d892ed64264c |
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directory.cwl
Inspect provided directory and return filenames. Generate a new directory and return it (including content). |
https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/directory.cwl Branch/Commit ID: 58274ef14adbbf7e09dbf6e5170780179669078b |
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wf-loadContents2.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/wf-loadContents2.cwl Branch/Commit ID: 5e3fac092a720c5670ae3e787eabe1aaade71d83 |
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kmer_top_n_extract
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_top_n_extract.cwl Branch/Commit ID: 8aa85573e659ef67163537d6811afdddcfad53dc |
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Bacterial Annotation, pass 4, blastp-based functional annotation (second pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass4.cwl Branch/Commit ID: 55e85a6c1a3d3ae2b47e9ae5363132a12824b1d9 |
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revsort_datetime.cwl
Reverse the lines in a document, then sort those lines. |
https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/revsort_datetime.cwl Branch/Commit ID: d5d86428e41f7e754a49e8d27e5abaee0762645e |
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default-dir5.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/default-dir5.cwl Branch/Commit ID: 0209b0b7ce66f03c8498b5a686f8d31690a2acb3 |
