Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Unaligned BAM to BQSR and VCF

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/bam_to_bqsr_no_dup_marking.cwl

Branch/Commit ID: 6bfb64375e7ebb6eb40f463ede86d8deccdb9eff
workflow graph workflow_input_sf_expr_v1_1.cwl

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/workflow_input_sf_expr_v1_1.cwl

Branch/Commit ID: 917a880e3a48c2ea7da10aeae20f9a03fb1c6a62
workflow graph exome alignment and germline variant detection, with optitype for HLA typing

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/germline_exome_hla_typing.cwl

Branch/Commit ID: c6bbd4cdd612b3b5cc6e9000df4800c21e192bf5
workflow graph default-wf5.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/default-wf5.cwl

Branch/Commit ID: 6d2998467fada81e5024c1f8594ae167514cb290
workflow graph gathered exome alignment and somatic variant detection

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/gathered_somatic_exome.cwl

Branch/Commit ID: e0b3c76e38630fb6234414b5adebfb6a4fb23117
workflow graph clustering.cwl

https://github.com/Epigenomics-Screw/Screw.git

Path: cwl/tools/clustering.cwl

Branch/Commit ID: 368a12dcf333838bbac53142d27746216bc7dc83
workflow graph gathered exome alignment and somatic variant detection

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/somatic_exome_gathered.cwl

Branch/Commit ID: 026bba9511561246ad65458f0f55c88cead26fbd
workflow graph module-6

https://github.com/mskcc/roslin-variant.git

Path: setup/cwl/module-6.cwl

Branch/Commit ID: 302b220bd06c195e43715c19685cb9c04692a73a
workflow graph phaseup-concat.cwl

https://git.astron.nl/RD/VLBI-cwl.git

Path: workflows/phaseup-concat.cwl

Branch/Commit ID: df8ae840c8223132825340b439393bc39ccfa2c5
workflow graph Unaligned BAM to BQSR and VCF

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/bam_to_bqsr.cwl

Branch/Commit ID: f90b39e1b05e9bb37079b09f337f7e7ba5027f99