Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Tumor-Only Detect Variants workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/tumor_only_detect_variants.cwl Branch/Commit ID: 28d1065759cbd389594ee33b41fd1103ced5436d |
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exome alignment and somatic variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/somatic_exome.cwl Branch/Commit ID: db0a91eb094d0a7c58042d4264986ea042dd4827 |
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exome alignment and germline variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/germline_exome.cwl Branch/Commit ID: 735be84cdea041fcc8bd8cbe5728b29ca3586a21 |
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Unaligned to aligned BAM
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/align.cwl Branch/Commit ID: 60d8a9e6c5f571ec9b37f10290a1f4613013f3e1 |
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blastp_wnode_naming
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https://github.com/ncbi/pgap.git
Path: task_types/tt_blastp_wnode_naming.cwl Branch/Commit ID: 55e85a6c1a3d3ae2b47e9ae5363132a12824b1d9 |
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sec-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/sec-wf.cwl Branch/Commit ID: 1338ffbf2492a2ca1be1d7c5c46597bd9205aa24 |
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bam to trimmed fastqs and biscuit alignments
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_trimmed_fastq_and_biscuit_alignments.cwl Branch/Commit ID: 27aa22e6f5d2fca75abca42d52867259fd0725b9 |
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wgs alignment with qc
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/wgs_alignment.cwl Branch/Commit ID: 9ad798f18104eb4a9c6c118f42691b9f5d9efd19 |
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count-lines1-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/count-lines1-wf.cwl Branch/Commit ID: 17268d1493d9e558113b2c35c0be6b3fb961b2a3 |
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Tumor-Only Detect Variants workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/tumor_only_detect_variants.cwl Branch/Commit ID: 9ad798f18104eb4a9c6c118f42691b9f5d9efd19 |
