Explore Workflows

Runs ChIP-Seq BioWardrobe basic analysis with paired-end input data files.

https://github.com/Barski-lab/workflows.git

Path: workflows/trim-chipseq-pe.cwl

Branch/Commit ID: 9a03dbe8829ca649814d9c8bd11fe3a673750a95

Process multiple dl0 files using process_dl0_dl1 and then merge the individual result files into one common output file using the merge tool. This is useful for processing simulation files in DIRAC as processing a single file per DIRAC job would result in very many, very short jobs that are not ideal for the workflow management system.

https://gitlab.cta-observatory.org/cta-computing/dpps/dpps-workflows.git

Path: datapipe/process_dl0_dl1_multiple.cwl

Branch/Commit ID: 61a3e7105a205242ca74c83fe809e19de8337408

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/aml_trio_cle_gathered.cwl

Branch/Commit ID: c6bbd4cdd612b3b5cc6e9000df4800c21e192bf5

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/816_wf.cwl

Branch/Commit ID: 048eb55aefd8d71d161fbc89ec0e888b8bfa0aa1

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/detect_variants_mouse.cwl

Branch/Commit ID: 6bfb64375e7ebb6eb40f463ede86d8deccdb9eff

https://git.astron.nl/RD/LINC.git

Path: workflows/linc_target/tec_and_amp.cwl

Branch/Commit ID: 0c5bd78e3f2d08564f5c9a563bcc8bb7704e6202

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/scatter-wf1.cwl

Branch/Commit ID: bfe56f3138e9e6fc0b9b8c06447553d4cea03d59

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/count-lines1-wf.cwl

Branch/Commit ID: 526f36f93655bfb098f766ff020708b5a707513a

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/default-wf5.cwl

Branch/Commit ID: 0cbbd92a87b1ba1d484bf50170c2749536fbbe77

https://github.com/EBI-Metagenomics/CWL-assembly.git

Path: cwl/post_assembly.cwl

Branch/Commit ID: 38738ecc25412a1614241ed9fddd063ea0843561