Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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kmer_top_n_extract
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_top_n_extract.cwl Branch/Commit ID: a1f39f21670be28427ceb91ceaeb9339545c18fc |
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canine_tumor_only_variant_filter_module.cwl
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https://github.com/d3b-center/canine-dev.git
Path: subworkflows/canine_tumor_only_variant_filter_module.cwl Branch/Commit ID: 462aaebbd442e84ea101b45b716df0174b88512e |
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basename-fields-test.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/basename-fields-test.cwl Branch/Commit ID: b3639a4c5075abc562b7f9b816be0d4f7d711703 |
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mutect panel-of-normals workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/panel_of_normals.cwl Branch/Commit ID: 9ad798f18104eb4a9c6c118f42691b9f5d9efd19 |
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scatter-valuefrom-wf2.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/scatter-valuefrom-wf2.cwl Branch/Commit ID: 4bf61c8a3d519eefd8b9271af73974bec62535ba |
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blastp_wnode_naming
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https://github.com/ncbi/pgap.git
Path: task_types/tt_blastp_wnode_naming.cwl Branch/Commit ID: b174aec5dba5524367061a2c60472c318430f4f5 |
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fastqtosam_pe.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/fastqtosam/fastqtosam_pe.cwl Branch/Commit ID: 3cb464a3a5c39cc060cd23d9c60918bc9ffb169b |
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facets-suite-workflow.cwl
Workflow for running the facets suite workflow on a single tumor normal pair Includes handling of errors in case execution fails for the sample pair |
https://github.com/mskcc/pluto-cwl.git
Path: cwl/facets-suite-workflow.cwl Branch/Commit ID: dbff0c5ae06a8b21ec70bc8279f32bce151cbfc2 |
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ConcordanceCheckerWorkflow.cwl
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https://github.com/DataBiosphere/topmed-workflows.git
Path: vcf-comparator/ConcordanceCheckerWorkflow.cwl Branch/Commit ID: a704a63eccf434f62bf7f5be974cc210c0ffba86 |
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Prepare user input
Prepare user input for NCBI-PGAP pipeline |
https://github.com/ncbi/pgap.git
Path: prepare_user_input2.cwl Branch/Commit ID: d40ef1462a4c210be3184609dbb3467ff61fc017 |
