Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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rRNA_selection.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/rRNA_selection.cwl Branch/Commit ID: 2104dc3 |
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5S-from-tablehits.cwl
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https://github.com/proteinswebteam/ebi-metagenomics-cwl.git
Path: tools/5S-from-tablehits.cwl Branch/Commit ID: master |
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scatter-valuefrom-wf1.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/scatter-valuefrom-wf1.cwl Branch/Commit ID: master |
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aggregate_visualize.cwl
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https://github.com/msk-access/qc_generation.git
Path: aggregate_visualize.cwl Branch/Commit ID: develop |
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zip_and_index_vcf.cwl
This is a very simple workflow of two steps. It will zip an input VCF file and then index it. The zipped file and the index file will be in the workflow output. |
https://github.com/icgc-tcga-pancancer/oxog-dockstore-tools.git
Path: zip_and_index_vcf.cwl Branch/Commit ID: 1.0.0 |
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exomeseq-gatk4-03-organizedirectories.cwl
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https://github.com/bespin-workflows/exomeseq-gatk4.git
Path: subworkflows/exomeseq-gatk4-03-organizedirectories.cwl Branch/Commit ID: v2.0.3 |
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main-NA24385-sv.cwl
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https://github.com/bcbio/bcbio_validation_workflows.git
Path: NA24385-sv/NA24385-sv-workflow/main-NA24385-sv.cwl Branch/Commit ID: master |
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picard_markduplicates
Mark duplicates |
https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/cwl/subworkflows/picard_markduplicates.cwl Branch/Commit ID: 1.0.5 |
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SC w/ Evaluation
Serial combination of KnowEnG tools |
https://github.com/knoweng-research/cwl-specification.git
Path: code/workflow.sc.cwl Branch/Commit ID: master |
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wf_split_self_and_idr.cwl
This workflow returns the reproducible number of split peaks given a single bam file and its size-matched input pair. This workflow splits the bam file first, but does not do anything to the input. |
https://github.com/YeoLab/merge_peaks.git
Path: cwl/wf_split_self_and_idr.cwl Branch/Commit ID: master |