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Showing results for "rnaseq" (Show all)
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gatk4W.cwl
Author: AMBARISH KUMAR er.ambarish@gmail.com & ambari73_sit@jnu.ac.in This is a proposed standard operating procedure for genomic variant detection using GATK4. It is hoped to be effective and useful for getting SARS-CoV-2 genome variants. It uses Illumina RNASEQ reads and genome sequence. |
https://github.com/ambarishK/bio-cwl-tools.git
Path: gatk4W.cwl Branch/Commit ID: fcab170f3e8a4bc70601650401cce2a9df42f484 |
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Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pvacseq.cwl Branch/Commit ID: e56f1024306aeb427d8aae2fff715ed2e8b8f86f |
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Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pvacseq.cwl Branch/Commit ID: 3b6d0475c80f5e452793a46a38ee188742b86595 |
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Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pvacseq.cwl Branch/Commit ID: 742dbafb5fb103d8578f48a0576c14dd8dae3b2a |
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Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pvacseq.cwl Branch/Commit ID: 87faba2fff8007ecc95160729b1c7cd0376e46f2 |
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Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs
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https://github.com/fgomez02/analysis-workflows.git
Path: definitions/pipelines/pvacseq.cwl Branch/Commit ID: 9c9e6a6a48eb321804ce772a2c2c12b4f2f32529 |
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Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pvacseq.cwl Branch/Commit ID: 1750cd5cc653f058f521b6195e3bec1e7df1a086 |
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Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pvacseq.cwl Branch/Commit ID: 8c4e7372247a7f4ed9ed478ef8ea1d239bc88af0 |
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rnaseq-pt1.cwl
Star/HTSeq RNA Seq Pipeline |
https://github.com/Duke-GCB/bespin-cwl.git
Path: workflows/rnaseq-pt1.cwl Branch/Commit ID: cb2c1423d635b2d8527103835b4918ffdf1f5b80 |
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rnaseq-header.cwl
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https://github.com/datirium/workflows.git
Path: metadata/rnaseq-header.cwl Branch/Commit ID: e284e3f6dff25037b209895c52f2abd37a1ce1bf |
