Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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cluster_blastp_wnode and gpx_qdump combined
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https://github.com/ncbi/pgap.git
Path: task_types/tt_cluster_and_qdump.cwl Branch/Commit ID: b174aec5dba5524367061a2c60472c318430f4f5 |
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kmer_seq_entry_extract_wnode
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_seq_entry_extract_wnode.cwl Branch/Commit ID: 85e33a80019f8a630cb59ec6663ada7deb83e453 |
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exome alignment with qc
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/exome_alignment.cwl Branch/Commit ID: 86fbeb95ef85111f3b4c6bc2bba8f06cef64e157 |
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record-in-secondaryFiles-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/record-in-secondaryFiles-wf.cwl Branch/Commit ID: ad91c844b5adfef514c059af364e20afc935e598 |
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umi duplex alignment workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/duplex_alignment.cwl Branch/Commit ID: 5c49c5a53259d4c88a02750f1a16a3c02d711115 |
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kmer_cache_store
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_cache_store.cwl Branch/Commit ID: 3a89a217ca75ec042ce3a11ebb6d1664a3ec6e7e |
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consensus_maf.cwl
Workflow to merge a large number of maf files into a single consensus maf file for use with GetBaseCountsMultiSample |
https://github.com/mskcc/pluto-cwl.git
Path: cwl/consensus_maf.cwl Branch/Commit ID: 3bc4fab5503e58521ed0eb9c0d035ac18460dc13 |
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count-lines13-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/count-lines13-wf.cwl Branch/Commit ID: 63f539ba60e91f0cb3ce7cda2c5da5c65525c375 |
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Tumor-Only Detect Variants workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/tumor_only_detect_variants.cwl Branch/Commit ID: ec45fad68ca10fb64d5c58e704991b146dc31d28 |
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downsample unaligned BAM and align
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/downsampled_alignment.cwl Branch/Commit ID: 92bdcd9fa879161834ecdb1c4c9ac7c46e940206 |
