Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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map medium and long reads (> 100 bp) against reference genome
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https://github.com/common-workflow-library/bio-cwl-tools.git
Path: bwa/BWA-Mem2-single.cwl Branch/Commit ID: release |
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etl_http_pdc.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/dnaseq/etl_http_pdc.cwl Branch/Commit ID: 1.1 |
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mpi_simple_wf.cwl
Simple 2 step workflow to check that workflow steps are independently picking up on the number of processes. First run the parallel get PIDs step (on the input num procs) then run (on a single proc) the line count. This should equal the input. |
https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/mpi_simple_wf.cwl Branch/Commit ID: main |
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ValidationWorkflowMissing
This is a placeholder for a missing acceptance workflow. |
https://github.com/gammasim/workflows.git
Path: workflows/ValidationWorkflowMissing.cwl Branch/Commit ID: main |
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Varscan Workflow
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https://github.com/litd/analysis-workflows.git
Path: definitions/subworkflows/varscan_pre_and_post_processing.cwl Branch/Commit ID: master |
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checkm
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https://github.com/ncbi/pgap.git
Path: checkm/wf_checkm.cwl Branch/Commit ID: dev |
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scatter-valuefrom-wf6.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/scatter-valuefrom-wf6.cwl Branch/Commit ID: master |
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Functional analyis of sequences that match the 16S SSU
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/16S_taxonomic_analysis.cwl Branch/Commit ID: c211071 |
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ValidateArrayElementCoordinates
Plot and compare array element coordinates. |
https://gitlab.desy.de/gernot.maier/cwlsandbox.git
Path: workflows/ValidateArrayElementCoordinates.cwl Branch/Commit ID: main |
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create_snap_and_analyze.cwl
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https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git
Path: create_snap_and_analyze.cwl Branch/Commit ID: 302f1f3 |
