Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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call_variants.cwl
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https://github.com/andurill/access-pipeline.git
Path: workflows/subworkflows/call_variants.cwl Branch/Commit ID: 3441040dfaecba58150c13a95a6a93657b00778a |
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mpi_simple_wf.cwl
Simple 2 step workflow to check that workflow steps are independently picking up on the number of processes. First run the parallel get PIDs step (on the input num procs) then run (on a single proc) the line count. This should equal the input. |
https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/mpi_simple_wf.cwl Branch/Commit ID: 135a0c67afd67383c44e89fba136ccd9ce6afb1f |
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gcaccess_from_list
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https://github.com/ncbi/pgap.git
Path: task_types/tt_gcaccess_from_list.cwl Branch/Commit ID: 3bd060365f24a480b04951a3a75da807d42f010f |
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revsort.cwl
Reverse the lines in a document, then sort those lines. |
https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/revsort.cwl Branch/Commit ID: 0cbbd92a87b1ba1d484bf50170c2749536fbbe77 |
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WGS and MT analysis for fastq files
rna / protein - qc, preprocess, filter, annotation, index, abundance |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/wgs-noscreen-fasta.workflow.cwl Branch/Commit ID: 721aaf285e1848c3c52da38a1fed95192aeff8f4 |
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conflict.cwl#main
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/conflict.cwl Branch/Commit ID: 20bec583996f86de518feb51574ff6efc8784f49 Packed ID: main |
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running cellranger mkfastq and count
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cellranger_mkfastq_and_count.cwl Branch/Commit ID: 10870aefd20469e728969269ff3c54b3b8339a18 |
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record-in-secondaryFiles-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/record-in-secondaryFiles-wf.cwl Branch/Commit ID: 7d7986a6e852ca6e3239c96d3a05dd536c76c903 |
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HBA_calibrator.cwl
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https://git.astron.nl/RD/LINC.git
Path: workflows/HBA_calibrator.cwl Branch/Commit ID: 1ccaf1c3f2f90a359e043b33e700c35dfd06fe8c |
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mut.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/mut.cwl Branch/Commit ID: 665141f319e6b23bd9924b14844f2e979f141944 |
