Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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gathered exome alignment and somatic variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/gathered_somatic_exome.cwl Branch/Commit ID: ddd748516b25256a461ea9277303406fa2759b00 |
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count-lines19-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/count-lines19-wf.cwl Branch/Commit ID: c7c97715b400ff2194aa29fc211d3401cea3a9bf |
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WGS QC workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/qc_wgs.cwl Branch/Commit ID: e59c77629936fad069007ba642cad49fef7ad29f |
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wf-jointcall.cwl
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https://github.com/bcbio/bcbio_validation_workflows.git
Path: giab-joint/giab-joint-workflow/wf-jointcall.cwl Branch/Commit ID: 24e9fff0d5e406323b826c0e8bd150be0ff8aba4 |
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exome alignment with qc
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/exome_alignment.cwl Branch/Commit ID: 040a3d1a719736d7fce6db83702d3fb7f9d69eac |
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Downsample and HaplotypeCaller
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/downsample_and_recall.cwl Branch/Commit ID: d3e4bf55753cd92f97537c7d701187ea92d1e5f0 |
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foreign_screening.cwl
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https://github.com/ncbi/pgap.git
Path: vecscreen/foreign_screening.cwl Branch/Commit ID: b0ee40d34d233f1611c2e2c66b6d22a3b7deec05 |
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kmer_seq_entry_extract_wnode
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_seq_entry_extract_wnode.cwl Branch/Commit ID: 2d851682ba1bf2aaaacb3677253b55ceb59c8568 |
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taxonomy_check_16S
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https://github.com/ncbi/pgap.git
Path: task_types/tt_taxonomy_check_16S.cwl Branch/Commit ID: ca75d68eb74c93b35b404ec7908dc5b260e16466 |
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wgs alignment and tumor-only variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/wgs.cwl Branch/Commit ID: a670f323e77e02d9b77be9a13d73d5276dd3676c |
