Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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gatk-best-practice-generic-germline-short-variant-per-sample-cal_decomposed.cwl
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Path: gatk-best-practice-generic-germline-short-variant-per-sample-cal_decomposed.cwl Branch/Commit ID: master |
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fail-unconnected.cwl
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Path: v1.0/v1.0/fail-unconnected.cwl Branch/Commit ID: master |
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tRNA_selection.cwl
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Path: tools/tRNA_selection.cwl Branch/Commit ID: 56dafa4 |
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no-inputs-wf.cwl
Workflow without inputs. |
Path: tests/no-inputs-wf.cwl Branch/Commit ID: main |
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collate_unique_SSU_headers.cwl
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Path: tools/collate_unique_SSU_headers.cwl Branch/Commit ID: 3168316 |
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wf_demultiplex_se.cwl
This workflow takes in single-end reads, and performs the following steps in order: demux_se.cwl (does not actually demux for single end, but mirrors the paired-end processing protocol) |
Path: cwl/wf_demultiplex_se.cwl Branch/Commit ID: master |
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04-quantification-se-revstranded.cwl
RNA-seq 04 quantification |
Path: v1.0/RNA-seq_pipeline/04-quantification-se-revstranded.cwl Branch/Commit ID: master |
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qiime2 DADA2 detect/correct sequence data
Option 1: DADA2 from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/ |
Path: packed/qiime2-step2-dada2.cwl Branch/Commit ID: qiime2-workflow Packed ID: qiime2-03-dada2.cwl |
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collate_unique_SSU_headers.cwl
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Path: tools/collate_unique_SSU_headers.cwl Branch/Commit ID: fa86fce |
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zip_and_index_vcf.cwl
This is a very simple workflow of two steps. It will zip an input VCF file and then index it. The zipped file and the index file will be in the workflow output. |
Path: zip_and_index_vcf.cwl Branch/Commit ID: develop |
