Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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ChIP-seq peak caller workflow MACS2 based
This workflow execute peak caller and QC for ChIP-seq using MACS2 |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/ChIP-Seq/peak-calling-MACS3-genome-size.cwl Branch/Commit ID: 590ed6c9803ba670411c48650bc24deef7863925 |
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running cellranger mkfastq and count
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cellranger_mkfastq_and_count.cwl Branch/Commit ID: 88f1e02b261bf9ce882eba306b6245c64328632b |
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count-lines3-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/count-lines3-wf.cwl Branch/Commit ID: 886a6ac41c685f20d39e352f9c657e59f3312265 |
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delay-calibration.cwl
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https://git.astron.nl/RD/VLBI-cwl.git
Path: workflows/delay-calibration.cwl Branch/Commit ID: d5e9fc986032d28031f914a9e97439877275d292 |
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sec-wf-out.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/sec-wf-out.cwl Branch/Commit ID: baefdcb58fcc76e3378cf705fc6a3e69ef35bb47 |
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linc_target.cwl
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https://git.astron.nl/RD/LINC.git
Path: workflows/linc_target.cwl Branch/Commit ID: cff7fed6aa41fb1ccacd5235dec289b4e7ef70eb |
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revsort_datetime.cwl
Reverse the lines in a document, then sort those lines. |
https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/revsort_datetime.cwl Branch/Commit ID: d7c4d48fcd1aef2cae7ba31445e73d59b377e978 |
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exome alignment and somatic variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/somatic_exome_mouse.cwl Branch/Commit ID: 479c9b3e3fa32ec9c7cd4073cfbccc675fd254d9 |
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dynresreq-workflow-inputdefault.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/dynresreq-workflow-inputdefault.cwl Branch/Commit ID: 31bda22357987171f02ae6513fcc26e011e6afed |
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trim-chipseq-pe.cwl
Runs ChIP-Seq BioWardrobe basic analysis with paired-end input data files. |
https://github.com/Barski-lab/workflows.git
Path: workflows/trim-chipseq-pe.cwl Branch/Commit ID: de847468843203ce92b6d19323c5fe77dc488e34 |
