Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph cache_asnb_entries

https://github.com/ncbi/pgap.git

Path: task_types/tt_cache_asnb_entries.cwl

Branch/Commit ID: 0d9e6bb52eac0c209af3977aa779e39aaa432458
workflow graph umi duplex alignment workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/duplex_alignment.cwl

Branch/Commit ID: 51724b44c96e5fd849ae55b752865b80bc47d66c
workflow graph Downsample and HaplotypeCaller

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/downsample_and_recall.cwl

Branch/Commit ID: 00df82a529a58d362158110581e1daa28b4d7ecb
workflow graph PGAP Pipeline, simple user input, PGAPX-134

PGAP pipeline for external usage, powered via containers, simple user input: (FASTA + yaml only, no template)

https://github.com/ncbi/pgap.git

Path: pgap.cwl

Branch/Commit ID: a402541b8530f30eab726c160da90a23036847a1
workflow graph exome alignment and somatic variant detection

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/somatic_exome.cwl

Branch/Commit ID: 869b331cfeb9dbd5907498e3eccdebc7c28283e5
workflow graph LBA_target.cwl

https://git.astron.nl/RD/LINC.git

Path: workflows/LBA_target.cwl

Branch/Commit ID: a94862bb3d50860cd348a5d5d1aa76fa0cde332a
workflow graph gathered exome alignment and somatic variant detection

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/gathered_somatic_exome.cwl

Branch/Commit ID: 040a3d1a719736d7fce6db83702d3fb7f9d69eac
workflow graph workflow.cwl

https://github.com/lanl/BEE.git

Path: examples/cat-grep-tar/workflow.cwl

Branch/Commit ID: 17da9ca498f98c0279bc53d25c09210ab256024d
workflow graph step5: The process of updating the GFF format file from identifying TSS (transcription start sites) from CAGE-seq data

\" The process of updating the GFF format file from identifying TSS - transcription start sites - from paired-end CAGE-seq data. This workflow consists of the following files: (1) Tools/06_combined_exec_TSSr.cwl, (2) Tools/07_join_all_assignedClusters.cwl, (3) Tools/08_uniq_tss_feature.cwl, (4) Tools/09_update_gtf.cwl \"

https://github.com/RyoNozu/CWL4IncorporateTSSintoGXF.git

Path: workflow/04_tssr_subworkflow_pe.cwl

Branch/Commit ID: 9728a86f7b73f7657a1f261e77a14ca59bdd561b
workflow graph bacterial_orthology

https://github.com/ncbi/pgap.git

Path: bacterial_orthology/wf_bacterial_orthology.cwl

Branch/Commit ID: 54c5074587af001a44eccb4762a4cb25fa24cb3e