Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Bacterial Annotation, pass 2, blastp-based functional annotation (first pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass2.cwl Branch/Commit ID: efe2b9b032560e00269e06668b3aca56936ec291 |
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spurious_annot pass2
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https://github.com/ncbi/pgap.git
Path: spurious_annot/wf_spurious_annot_pass2.cwl Branch/Commit ID: efe2b9b032560e00269e06668b3aca56936ec291 |
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Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass1.cwl Branch/Commit ID: efe2b9b032560e00269e06668b3aca56936ec291 |
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spurious_annot
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https://github.com/ncbi/pgap.git
Path: spurious_annot/wf_spurious_annot_pass1.cwl Branch/Commit ID: efe2b9b032560e00269e06668b3aca56936ec291 |
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Run genomic CMsearch (Rfam rRNA)
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https://github.com/ncbi/pgap.git
Path: bacterial_ncrna/wf_gcmsearch.cwl Branch/Commit ID: efe2b9b032560e00269e06668b3aca56936ec291 |
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Create Genomic Collection for Bacterial Pipeline, ASN.1 input
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https://github.com/ncbi/pgap.git
Path: genomic_source/wf_genomic_source_asn.cwl Branch/Commit ID: efe2b9b032560e00269e06668b3aca56936ec291 |
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Run tRNAScan
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https://github.com/ncbi/pgap.git
Path: bacterial_trna/wf_trnascan.cwl Branch/Commit ID: efe2b9b032560e00269e06668b3aca56936ec291 |
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fp_filter workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/fp_filter.cwl Branch/Commit ID: 26806d99f8e2a241715fd081e712d4e3763db5b8 |
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bact_get_kmer_reference
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https://github.com/ncbi/pgap.git
Path: task_types/tt_bact_get_kmer_reference.cwl Branch/Commit ID: 48381989cb983567ed936fde632714933df65350 |
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Detect Variants workflow for WGS pipeline
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/detect_variants_wgs.cwl Branch/Commit ID: efbbe5ed51f6ac583e87a348785c72818a33f56e |
