Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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gdc_dnaseq.bamfastq_align.workflow.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: gdc-dnaseq-aln-cwl/gdc_dnaseq.bamfastq_align.workflow.cwl Branch/Commit ID: 65510af2ab705bfd3e9d4ca7281335de2adba2df |
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merge_svs.cwl
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https://github.com/common-workflow-lab/wdl-cwl-translator.git
Path: wdl2cwl/tests/cwl_files/merge_svs.cwl Branch/Commit ID: 2a1b9d0cbf1fd2b1c9f6faab2ef8254924642b82 |
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screen out taxa
Remove sequences which align against a reference set using bowtie2. The references are preformatted (index files) |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/organism-screening.workflow.cwl Branch/Commit ID: a14af40f76ed6108d6205984e03dd0870b0141eb |
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js_output_workflow.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/js_output_workflow.cwl Branch/Commit ID: 20f01e04328537714e57d136e242d3e7a9d44266 |
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alignment_novoalign_multi_readgroup.cwl
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https://github.com/uc-cdis/genomel_pipelines.git
Path: genomel/cwl/workflows/harmonization/alignment_novoalign_multi_readgroup.cwl Branch/Commit ID: 39ddc4b79dc93076787046f591225dc7ca3100ce |
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star_align_workflow.cwl
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https://github.com/NCI-GDC/gdc-rnaseq-cwl.git
Path: rnaseq-star-align/subworkflows/rnaseq_processing/star_align_workflow.cwl Branch/Commit ID: 05460f7dfca5a900d7635ccae0e1b28cf764a02f |
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workflow-slurmcern.cwl
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https://github.com/reanahub/reana-demo-root6-roofit.git
Path: workflow/cwl/workflow-slurmcern.cwl Branch/Commit ID: 24df2009c4fd6ad54ae629c97942687ffa1ba6e4 |
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bact_get_kmer_reference
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https://github.com/ncbi/pgap.git
Path: task_types/tt_bact_get_kmer_reference.cwl Branch/Commit ID: 466a62729c20256c2f962d247ffaf2e782a0a023 |
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transform.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/dnaseq/transform.cwl Branch/Commit ID: 3cd06184444bb85e9773a3e7dc548c6dd3bdaccb |
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Detect DoCM variants
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/docm_germline.cwl Branch/Commit ID: 767e3dc7448da5bc44e4817c4161f6e4530032e2 |
