Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph contaminant_cleanup

This workflow detect and remove contamination from a DNA fasta file

 https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/Contamination/fastq-contaminant-cleanup.cwl

Branch/Commit ID: b5a440939ac6022ee81aeeb0dd7daf3983228a61
workflow graph taxonomy_check_16S

https://github.com/ncbi/pgap.git

Path: task_types/tt_taxonomy_check_16S.cwl

Branch/Commit ID: b174aec5dba5524367061a2c60472c318430f4f5
workflow graph PGAP Pipeline

PGAP pipeline for external usage, powered via containers

 https://github.com/ncbi/pgap.git

Path: wf_common.cwl

Branch/Commit ID: aa64bf6a90e0780ab564de865dbb027df98c0a01
workflow graph count-lines12-wf.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/count-lines12-wf.cwl

Branch/Commit ID: b3639a4c5075abc562b7f9b816be0d4f7d711703
workflow graph stdout-wf_v1_2.cwl

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/stdout-wf_v1_2.cwl

Branch/Commit ID: 15c8467d6d3c31a95ccc682095cf34aad125ca8c
workflow graph step-valuefrom3-wf_v1_2.cwl

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/step-valuefrom3-wf_v1_2.cwl

Branch/Commit ID: c46a3ad4e488e75b7a58032c129f0605f5e84f40
workflow graph bacterial_orthology

https://github.com/ncbi/pgap.git

Path: bacterial_orthology/wf_bacterial_orthology.cwl

Branch/Commit ID: a1f39f21670be28427ceb91ceaeb9339545c18fc
workflow graph stage_data_workflow.vcf_to_aliquot_maf.cwl

https://github.com/NCI-GDC/aliquot-maf-cwl.git

Path: vcf-to-aliquot-maf/subworkflows/stage_data_workflow.vcf_to_aliquot_maf.cwl

Branch/Commit ID: 5398c123941e3dafafaf7356d84c0ba248dd17dc
workflow graph scatter-valuefrom-wf4.cwl#main

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/scatter-valuefrom-wf4.cwl

Branch/Commit ID: ad91c844b5adfef514c059af364e20afc935e598

Packed ID: main
workflow graph tindaisy-postmerge.cwl

https://github.com/ding-lab/TinDaisy.git

Path: cwl/workflows/tindaisy-postmerge.cwl

Branch/Commit ID: 1f53a58d0ee90c207bac7e4c97461f6249b3ea6f