Explore Workflows
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| Graph | Name | Retrieved From | View |
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Filter Protein Seeds I; Find ProSplign Alignments I
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https://github.com/ncbi/pgap.git
Path: protein_alignment/wf_compart_filter_prosplign.cwl Branch/Commit ID: efe2b9b032560e00269e06668b3aca56936ec291 |
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Filter Protein Alignments I
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https://github.com/ncbi/pgap.git
Path: protein_alignment/wf_align_filter.cwl Branch/Commit ID: efe2b9b032560e00269e06668b3aca56936ec291 |
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Seed Search Compartments
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https://github.com/ncbi/pgap.git
Path: protein_alignment/wf_seed.cwl Branch/Commit ID: efe2b9b032560e00269e06668b3aca56936ec291 |
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Seed Protein Alignments I
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https://github.com/ncbi/pgap.git
Path: protein_alignment/wf_seed_1.cwl Branch/Commit ID: efe2b9b032560e00269e06668b3aca56936ec291 |
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BLAST against rRNA db
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https://github.com/ncbi/pgap.git
Path: bacterial_noncoding/wf_blastn.cwl Branch/Commit ID: efe2b9b032560e00269e06668b3aca56936ec291 |
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Run genomic CMsearch (5S rRNA)
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https://github.com/ncbi/pgap.git
Path: bacterial_noncoding/wf_gcmsearch.cwl Branch/Commit ID: efe2b9b032560e00269e06668b3aca56936ec291 |
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blastp_wnode_naming
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https://github.com/ncbi/pgap.git
Path: task_types/tt_blastp_wnode_naming.cwl Branch/Commit ID: efe2b9b032560e00269e06668b3aca56936ec291 |
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trnascan_wnode and gpx_qdump combined
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https://github.com/ncbi/pgap.git
Path: bacterial_trna/wf_scan_and_dump.cwl Branch/Commit ID: efe2b9b032560e00269e06668b3aca56936ec291 |
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Bacterial Annotation, pass 4, blastp-based functional annotation (second pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass4.cwl Branch/Commit ID: aa64bf6a90e0780ab564de865dbb027df98c0a01 |
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Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass1.cwl Branch/Commit ID: aa64bf6a90e0780ab564de865dbb027df98c0a01 |
